Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0451 ATGGAGAAGAAAGAGATAGGTGTGAAGGCCGAGGAAGCAGTTGGATCCTCTTCGTTAGGGGGTTATCATTCTAACAGTTTTCCACTTTCGAGTGTATTTGATTTCCATGAAGTAGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTACAGGACTGTAGTCCTCTGCTAGATTTGCCCCAACTATCTCCTTCTCATCTCAAAAATCCATGTGCTACTGCAAAAGAGTGCTGCGAGGTGTTGAATCAACAGCCTACCACTCCAAACTCTTCATCGATTTCATCTGCGTCCAGTGAGGCAGTGAATGATGAACACATGAAAACTGTTGACCAAGGAGATGAACAGCCAAAGGCCAAGAAACAATTGAAGGCCAAAAAGACAAATCAGAAGAAACAGAGAGAACCCAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAGGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAGAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGCTTCATGTAATGTAAAGAAGCGAGTGGAGCGATCCTTTACTGATCCAAGCATTGTAGTCACAACCTACGAAGGCCAACACACACATCCAAGCCCACTCATGCCTCGCACGACCCTCGCCGGAGCTTCAGTACCACCAATGGTCTCCGCCGGATGTACCCCCGCATTTGGTTCAGCTGTGTCGTCAGGGAACTTATCCCAACATTATCAAGAGCAGCACCAACATCAACATCAACGATTCCTTGTTAACACATTGTCGTCTTTGAATTTTCCTCGCATTAATGATTCAACTTCAAAGAATAATATTGCTGCTTTTCCTCAAGACAGACGGCCTTGCAATCGTGGGATGAATGTTCTTCTAAGGGACCATGGGCTTCTCCAAGACATCATTCCTTCCCATATGCTGAAAGAAGAGTAG 948 0.4578 MEKKEIGVKAEEAVGSSSLGGYHSNSFPLSSVFDFHEVEKSSLGFMELLGVQDCSPLLDLPQLSPSHLKNPCATAKECCEVLNQQPTTPNSSSISSASSEAVNDEHMKTVDQGDEQPKAKKQLKAKKTNQKKQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSIVVTTYEGQHTHPSPLMPRTTLAGASVPPMVSAGCTPAFGSAVSSGNLSQHYQEQHQHQHQRFLVNTLSSLNFPRINDSTSKNNIAAFPQDRRPCNRGMNVLLRDHGLLQDIIPSHMLKEE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0451 315 MobiDBLite consensus disorder prediction 1 21 - -
Dere02g0451 315 MobiDBLite consensus disorder prediction 104 122 - -
Dere02g0451 315 PIRSF WRKY_txn_fact_IIc 1 315 IPR017396 GO:0003700
Dere02g0451 315 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0451 315 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 253 IPR044810 GO:0003700
Dere02g0451 315 SUPERFAMILY WRKY DNA-binding domain 141 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0451 315 MobiDBLite consensus disorder prediction 85 103 - -
Dere02g0451 315 FunFam WRKY transcription factor 57 135 209 - -
Dere02g0451 315 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0451 315 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0451 315 MobiDBLite consensus disorder prediction 85 134 - -
Dere02g0451 315 Gene3D WRKY domain 134 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0451 Dere-ChrDere02 4511073 4512385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0451 31 315 WRKY Transcription Factor Family AT2G47260 48.204 9.78e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g0451 WRKY 9.1e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3506 01 49497143 49498617 Dere02g0451 02 4511073 4512385 CCT
Dere02g0451 02 4511073 4512385 Dere02g0451 02 4511073 4512385 ECH