Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0446 ATGGTTCCCAAAACTCGTTTCCAAGTCATTCTGTTCCTTCTTTCATCTCTATGCTTCACTTGCAAATCTTCCTCTTGGAGCTCAGATAGGCATGCAGATTACGAGAATTGGATTTCATGGAACCTCAAGAATTACCAGAAGGCGGCTGTGTTGAACACCAAATGGACTGTTCAAGGACCCGATTTGAAGCTGGGCATGGCTGAGAATAATAGAGTTAGAATAACTGTTCGTCAAGACGGTAGTGGTGACTTCAACACCATTAGACAAGCACTAGATAGCATTCCACCCCACAACACCAGAAGAATTATAGTATTGATCGGACCAGGTGTTTATAGGGAGAAGATAGTGATACCCAGAAATATGCCGTTCATAACATTGCTAGGGGACGCTGGGAATCCACCAACTATTACGGGGAATGATACAGCATCCGTCACCGGAAGGGATGGGATACCGTTGGGGACATTCCAGAGTGCCACTGTTGCTGTGGATGCTAATTATTTTATTGCCATCAACATCAAATTTGAGAACACAGCCCTGCACGAGGTAGGATCGGCGGGAGGACAAGCCGTAGCACTTCGCATCTCAGGGACCAAAGCTGCATTTTACAATTGCAGCTTCTATGGGGATCAAGACACACTCTATGATCACAAGGGACTTCACTACTTCGACAATTGCTTTATCCAAGGCTCTGTTGATTTCATCTTCGGCTCCGGCAGATCCCTTTACGAGAACTGCTATCTAAATTCGATAGCGAAGAAGGTAGCGTCCATCACAGCTCAGAAGCGTACAAATGCATCGTTAGAAAGTGGGTTTTCGTTTAAAAACAGCGTTATAACAGGAAGTGGGCAAGTTTATCTTGGAAGAGCGTGGGGCGATTATTCCAGAGTTGTTTTCTCTTACACCTACATGGACAAGATAGTTCTTCGCCAAGGCTGGAGTGATTGGGGTGACCAAAAGCGCGACTTGAGAGTATATTATGGAGAATACAAGTGTAGTGGGCCTGGGGCTAACTTGACAGGACGAGTGGCATGGGCACGCATGCTTACCGACCAAGAGGCTCAGCCTTTTATCGGAACTCATTACATTGAAGGGGACACATGGCTCGTTACCCTCCCCAGTTGA 1122 0.4626 MVPKTRFQVILFLLSSLCFTCKSSSWSSDRHADYENWISWNLKNYQKAAVLNTKWTVQGPDLKLGMAENNRVRITVRQDGSGDFNTIRQALDSIPPHNTRRIIVLIGPGVYREKIVIPRNMPFITLLGDAGNPPTITGNDTASVTGRDGIPLGTFQSATVAVDANYFIAINIKFENTALHEVGSAGGQAVALRISGTKAAFYNCSFYGDQDTLYDHKGLHYFDNCFIQGSVDFIFGSGRSLYENCYLNSIAKKVASITAQKRTNASLESGFSFKNSVITGSGQVYLGRAWGDYSRVVFSYTYMDKIVLRQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVAWARMLTDQEAQPFIGTHYIEGDTWLVTLPS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0446 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 67 368 - -
Dere02g0446 373 Pfam Pectinesterase 74 365 IPR000070 GO:0030599|GO:0042545
Dere02g0446 373 ProSitePatterns Pectinesterase signature 2. 227 236 IPR033131 -
Dere02g0446 373 SUPERFAMILY Pectin lyase-like 73 368 IPR011050 -
Dere02g0446 373 Gene3D - 68 371 IPR012334 -
Dere02g0446 373 FunFam Pectinesterase 69 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0446 Dere-ChrDere02 4391425 4393421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0446 74 369 Carbohydrate Esterase AT5G47500 46.980 2.84e-92 279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0446 02 4391425 4393421 Dere02g0446 02 4391425 4393421 ECH