LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g0441	ATGGTGAATGTAGTGGCCTACTATCAAATCAAATGGGATAACATTTGTAGGGTAGGAGTGTCACAGGCAAAGTCAACGAGAGTTGCTATGAGGTCGGGGAAGCACAGCAACACAGGAGAGATAGGTAATGTCGGACTTGGGATAAGGTTTTCAATTTCCATTGATGGGCTAATTCAAATAAGTACAGTTCGTGTTAAAGCAACATGCAAGCCAGCCTGGTTTAGCAAGAAGATGATTATTCCATTCGATAATAAAGGAGACAATGGGAAATGGGAAAAGGGAAAAGGATGGAAACGAGGACCAAAACCTCGTGATGTTGACATCTTTTTTGGGAAAACCTTCAATATGGTTGGTTTATACCCTAATCCAGAAACTCCTGATATTGATTACCTTGGAGTGCCTGTTCATCCTCTGAAACTCATTCAACAAGACTTTACCATGGAAGAAACATTTGTACCTTTTGAAGGAATCAAGAATGACCTCAGGGGAAGGTTAATGTGCTACAAGCAAGACTGGACTGGTGGATTCAGAGCAGGCTTAAGGATTCTGGCCCCCACCACCTACATATTTTTTGCTTCCGCGATTCCTGTCATTTCATTTGGTGAACAACTAGAGCGAAATACTGATGGAGTTCTAACAGCTGTTCAAACCCTGGCATCCACTTCAGTTTGTGGCATCATACACTCAATATTAGGGGGTCAACCTTTACTGATTTTAGGAGTTGCAGAGCCTACCGTGATCATGTACACATTCATGTTCAATTTTGCTAAAGAAAGACCAGATTTGGGTCGCAATCTGTTTCTAGCATGGAGTGGATGGGTATGCGTGTGGACAGCACTACTGTTGTTCTTGATGTCTATCTTAGGAGCTTGCTCCATAATCAACAGGTTTACACGAATTGCAGGGGAGTTGTTTGGCCTGCTCATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTTGTAGATGAGTTTCGCATACCACAGCGAGAAAATCCAAAATTAATTGAGTTTATACCTTCATGGAGGTTTGCTAATGGGATGTTTGCTTTAGTACTGTCATTTGGCCTTCTCCTCACTGCACTAAAAAGCAGAAAGGCTAGGTCATGGCGTTATGGTTCTGGTTGGCTTCGAAGCCTAATAGCAGACTACGGTGTGCCACTTATGGTCCTTATTTGGACCGGCATTTCTTACATACCAGCTGCAAATGTTCCACCTGGTGTCCCAAGGCGCCTCTTCAGCCCAAATCCATGGTCACCTGGTGCTTATGACAATTGGACTGTTATTAAGGATATGGTCCACGTTCCTATTTTTTACATAATCGGAGCATTTATTCCAGCAACCATGATTGCTGTACTTTATTACTTTGACCATAGTGTGGCATCCCAACTTTCCCAGCAGAAAGAGTTTAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTCCTTTTGGGGTTTCTGACCTTAATGTGTGGTCTTATTGGAATCCCTCCCTCAAATGGTGTCATACCACAGTCACCAATGCATACCAAGAGTCTGGCTACTCTTAAGCATCAGTTGCTTCGTAACAGACTAGTTACAACAGCACGAAAGAGTATCGGGAAGAATGCTAGTTTAGGACAATTATACGGCAACATGCAAGAAGCTTACCACCAAATGCAGACCCCTCTAGTTTACCAGGACCCCTCTGCTCGATTACAAGGACTAAAAGAATTAAAAGAATCAACCATCCAAGCAGCTACAAGTATGGGAAACATGGATGCCCCAGTAGATGAGACTATATTTGATGTAGAGAAAGAAATAGACGACCTATTGCCTGTTGAAGTGAAGGAACAACGACTAAGTAACTTGCTTCAATCGATGATGGTGGGGGGATGTGTTGCTGCCATGCCTGTCCTCAAGAAGATTCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCAATTGAGAGTCTACCCGGTAACCAGTTCTGGGAGAGGATCCTACTTCTCTTCACTGCACCCAGCAGAAGATTCAAGGTGCTTGAGGATTACCATGCTGCATTTGTGGAGACAGTGCCTTTCAAGACAATTGCAACATTCACCATTTTCCAAACAGTTTATCTGCTTGTATGTTTTGGACTAACTTGGGTTCCAATTGCCGGGGTTATGTTTCCTTTGATGATCATGTTGTTAGTTCCAGTAAGGCAGTATTTCCTCCCCAAATTTTTCAAAGGGGCTCACCTTCAAGAACTGGATGCAGCATCGTACGAGGAGCAACCTGCTTTACCATACAATCTTGCAACCCAATCAGAGTTTGGAGGTGGTACTTCTCAGATTGGAGAAGGTGAGATCCTAGATGAAGTTATCACCAGAAGCCGTGGGGAGTTCAGACACACAAGCAGCCCAAAGATAACAAGTTCCACCCCCACACCAGGTATCGATCCTAGAAGCCATCAGAGTCCACGTCTTTCATTCAGTTCTCGCATGGGTGAGGTTACAACGGAGCAAAGTCCTCGGTCTGGTGCAAGAGGTCCCTACAGTCCTAAGACCAGAGAAGTGAAACTATCAACTCTGGGAAAAAGCCCTCTTAACCCAGAATCAAAACAGCAAGACAAGCATCAAAAGTAA	2616	0.4385	MVNVVAYYQIKWDNICRVGVSQAKSTRVAMRSGKHSNTGEIGNVGLGIRFSISIDGLIQISTVRVKATCKPAWFSKKMIIPFDNKGDNGKWEKGKGWKRGPKPRDVDIFFGKTFNMVGLYPNPETPDIDYLGVPVHPLKLIQQDFTMEETFVPFEGIKNDLRGRLMCYKQDWTGGFRAGLRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLASTSVCGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPDLGRNLFLAWSGWVCVWTALLLFLMSILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPQRENPKLIEFIPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLIWTGISYIPAANVPPGVPRRLFSPNPWSPGAYDNWTVIKDMVHVPIFYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVTTARKSIGKNASLGQLYGNMQEAYHQMQTPLVYQDPSARLQGLKELKESTIQAATSMGNMDAPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQSMMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDYHAAFVETVPFKTIATFTIFQTVYLLVCFGLTWVPIAGVMFPLMIMLLVPVRQYFLPKFFKGAHLQELDAASYEEQPALPYNLATQSEFGGGTSQIGEGEILDEVITRSRGEFRHTSSPKITSSTPTPGIDPRSHQSPRLSFSSRMGEVTTEQSPRSGARGPYSPKTREVKLSTLGKSPLNPESKQQDKHQK	871

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g0441	871	Gene3D	Helical hairpin bin	164	206	-	-
	Dere02g0441	871	Pfam	HCO3- transporter family	348	519	IPR011531	GO:0006820\|GO:0016020
	Dere02g0441	871	Pfam	HCO3- transporter family	153	326	IPR011531	GO:0006820\|GO:0016020
	Dere02g0441	871	Pfam	HCO3- transporter family	608	698	IPR011531	GO:0006820\|GO:0016020
	Dere02g0441	871	MobiDBLite	consensus disorder prediction	795	839	-	-
	Dere02g0441	871	PANTHER	ANION EXCHANGE PROTEIN	142	756	IPR003020	GO:0005452\|GO:0006820\|GO:0016020
	Dere02g0441	871	MobiDBLite	consensus disorder prediction	790	871	-	-
	Dere02g0441	871	FunFam	probable boron transporter 2	164	206	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g0441	Dere-ChrDere02	4328938	4338310	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g0441	147	840	Antiporters	AT3G62270	81.871	0.0	1168