Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0434 ATGGTGGCCGAAGCGGACCTTGTGTGTCAACAGAGCGTCCCTGCGCTGGATGTACAGTATTTTCCCAAAGGAGCCAGTATTCATGAGATCGGAGATGCAGCTGTCACCACGCCTCCGAGTTTTGACCGAGTTCGTGCTTCTGAATTAGTATCTGCCGAGTTACTCAGTTCACAAGAAGATGTTAGACTTGCAGACAGAATATCAGACACTGCTCTTGATTCTGTGGTTCTTCAATTTGTCCCCAGCATCCGTTCTGGCAGTTTTGCTGACATTGGCCCCCGGAGATATATGGAAGATGAACATCTAAGGATAGATGATTTGTCCTCTCACATGGGTTCGCTATATACGTTTCCTGAACCTAGTGCCTTCTATGGGGTATTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATCCGAAAAAATGTTATGAGATTCTTTTTTGAAGATGTCAACTTCCCCCAGACATCTGAAGTTAATAATGTTTTCTTACAAGAGGCAGAGAACTCCCTCAGGAAGGCTTTTCTTTTGGCTGACTCGGCTTTGGCTGATGATTGCAGTGTGAGTAGCTCATCAGGGACTACAGCCCTTACTGCTTTGATATTTGGAAGGCTTCTACTGGTGGCCAATGCTGGTGATTGCCGTGCAGTTCTCTGCCGTAAAGGAGAGGCAATTGACATGTCTCAAGACCACAGGCCTATTTATCCATCAGAGAGGAGGCGAGTTGAGGAATTGGGTGGTTACATAGACGATGGTTATCTTAATGGAGTTTTATCAGTATCTCGAGCCCTGGGGGACTGGGATATGAAGTTTCCTCGTGGTTCTTCCTCGCCTTTGATTGCAGAGCCTGAGTTTCGTCAAGTGATTCTAACAGAGGATGATGAGTTCCTCATCATAGGTTGCGATGGGATTTGGGATGTGATGACAAGTCAGCATGCAGTGAGCCTTGTTCGTAGAAGCCTGAGGCGGCATGATGACCCAGAGCAATGCGCCAGAGACCTGGTCATGGAAGCATTACGGCTCAACACGTTTGACAATCTTACAGTGATTGTTGTGTGCTTTTCTCCTGTTGATCACAGGGAGCCCTCCCCACCGCGCCAGAGCAAATTGAGGTGCTGCAGAGAGGCCCTTTGTAGCTTGAGGAGCTTGTTGGAGGGCAGTGCAAGCAACTGA 1173 0.4791 MVAEADLVCQQSVPALDVQYFPKGASIHEIGDAAVTTPPSFDRVRASELVSAELLSSQEDVRLADRISDTALDSVVLQFVPSIRSGSFADIGPRRYMEDEHLRIDDLSSHMGSLYTFPEPSAFYGVFDGHGGPEAAAYIRKNVMRFFFEDVNFPQTSEVNNVFLQEAENSLRKAFLLADSALADDCSVSSSSGTTALTALIFGRLLLVANAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEELGGYIDDGYLNGVLSVSRALGDWDMKFPRGSSSPLIAEPEFRQVILTEDDEFLIIGCDGIWDVMTSQHAVSLVRRSLRRHDDPEQCARDLVMEALRLNTFDNLTVIVVCFSPVDHREPSPPRQSKLRCCREALCSLRSLLEGSASN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0434 390 FunFam Probable protein phosphatase 2C 22 68 357 - -
Dere02g0434 390 SMART PP2C_4 74 352 IPR001932 -
Dere02g0434 390 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Dere02g0434 390 SUPERFAMILY PP2C-like 78 356 IPR036457 -
Dere02g0434 390 PANTHER PROTEIN PHOSPHATASE 2C 78 352 IPR015655 GO:0004722|GO:0006470
Dere02g0434 390 Gene3D - 76 360 IPR036457 -
Dere02g0434 390 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Dere02g0434 390 CDD PP2Cc 83 354 IPR001932 -
Dere02g0434 390 Pfam Protein phosphatase 2C 94 346 IPR001932 -
Dere02g0434 390 SMART PP2C_SIG_2 99 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0434 Dere-ChrDere02 4295918 4298329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0434 97 386 PP2C-type Phosphatase Gene Family AT3G62260 69.728 8.33e-150 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Dere02g0434 PP2C 3.2e-65 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0434 02 4295918 4298329 Dere02g0434 02 4295918 4298329 ECH