Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0424 ATGATCGGTATATTGCCTTTTGTTTCAGAGAGAATCATGAGTTGTTTCAGCTGTTGCGAAGACGATGACCTCCACAAAGCTGCTGAGAGTGGAGGACCATACATGGTAAAAAATTCAGCAGGGAATGATGGAAATTATCATGCTTCTGAAACTGCAAAGCAGGGTGCTCAGACTGTTAAAGTCCAGCCCATTCAAGTTCCTGTAATACCAGCAGATGAACTAAAAGAGATTACAGATACTTTCGGGACCAATTCTCTGATTGGAGAAGGTTCCTATGGAAGAGTATATTATGGCGTTCTTAAAAGTGGCCAGACTGCAGCAATCAAGAAGTTAGACGCTAGTAAACAACCTGATGAGGAATTTTTAGCCCAGGTTTCCATGGTATCAAGGCTGAAGCATGAGAATTTTGTTCAATTACTAGGTTATTGTGTTGATGGAAGTTCCCGTGTTCTTGCTTATGAGTTTGCTTCTAATGGGTCTCTTCACGATATTTTACATGGCAGAAAAGGTGTCAAAGGAGCCCAGCCTGGTCCTGTTCTGTCATGGGCACAGAGAGTAAAAATTGCTGTGGGAGCTGCAAAAGGGCTTGAGTACTTGCACGAGATGGCTGATCCTCACATTATCCACCGAGACATCAAGTCAAGCAATGTACTAATTTTTGATGATGATGTTGCTAAGATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCTGCGCGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAACTGAATGCTAAAAGTGATGTATACAGCTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTGGATCATACACTACCTCGTGGACAGCAGAGTCTAGTTACTTGGGCTACGCCAAAACTTAGTGAGGATAAAGTCAGGCAGTGTGTTGATACTAGACTAGGAGGAGATTACCCTCCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCCGCACTATGCGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCCCTTCAACCTTTGTTGAATGCAAGACCTGGACCCGCTGGTGAAACACCAAATTAA 1122 0.434 MIGILPFVSERIMSCFSCCEDDDLHKAAESGGPYMVKNSAGNDGNYHASETAKQGAQTVKVQPIQVPVIPADELKEITDTFGTNSLIGEGSYGRVYYGVLKSGQTAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGSSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEMADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0424 373 Gene3D Phosphorylase Kinase; domain 1 42 155 - -
Dere02g0424 373 ProSiteProfiles Protein kinase domain profile. 81 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0424 373 SMART serkin_6 81 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0424 373 FunFam PTI1-like tyrosine-protein kinase 3 45 155 - -
Dere02g0424 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Dere02g0424 373 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Dere02g0424 373 Gene3D Transferase(Phosphotransferase) domain 1 156 365 - -
Dere02g0424 373 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Dere02g0424 373 FunFam pto-interacting protein 1 157 368 - -
Dere02g0424 373 Pfam Protein tyrosine and serine/threonine kinase 85 357 IPR001245 GO:0004672|GO:0006468
Dere02g0424 373 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 16 365 - -
Dere02g0424 373 CDD STKc_IRAK 87 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0424 Dere-ChrDere02 4218543 4222560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0424 60 364 Receptor kinase-like Gene Family AT3G58690 49.032 5.93e-90 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dere02g0424 PK_Tyr_Ser-Thr 2.1e-46 CL0016