Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0414 ATGATCCCAATGACGTTGTCGTTGGCTTCAAAGTCAGTGAGATTAGGTCCTGCAATCCAGTGGGGCCCACCCATTCTAACCACCGTCACAAATAGCCGTGCCTGCAACTGGGTTGACCTCAGGCGACCCCCCCACGTGGCGGCTACTACTCTTCTCCTGACTACAATGGATCATAACCAACATGCCCCTCGTGAATTGACCTTGGTAAGCTCCGACGACTTTCTCCGACGGGATTCAAATCGAATAACCGAGGATCAGGGCCGGTACAACGATGCTCCGATCAAAGAACTGGATTTCTTCTCCAGTTCAGGTAACAAAATTAGCAGTAATGATCACGCGCCTCGACATAAAGATCATGACCGCCGTGACAGGATGGGTTACAGCGATGGATCAACTCCTTGCATTGATCGGCCTGTAAACACCGGCCTAAATTTGACGGGCGGAAGTTCTAGAATGTTAAGAGCAACAAGTGATGAAAATCCAAATGCTGAGCTGAGTACAATCCAAGGTGAATTACGGAGACTACATGAAGAGAATCGGAAGTTGAGAACTATGCTGGATCAGATCACCAAAAGCTATAGCCAACTTCAAGCTCAGCTATTCATCACTTTGCAAAAACAAAAGCCTCTGCAGGTTGAAGCAAATGGCGTAATGTCGGAGAAACAGTATATGGAACCACGGCCATCTACCAATTTAGACATCAATGATGCATCGGTTTCTGATGATAAGACTCAAGAGCTATCAGTTTCGGCGCCCTCAAACAATGCGGAAGTATTGTCAAAGCAGCGTGACCTTCATGTGACTAAACGTCTCGGAAAGCGAGCATGCCCTGAAGATGGTTTTGACCTCTCCTCTCAGAGTTGGGGATCGTCCAAGAGTCCCAAGTTACAAGAATCCAAGAGAGACGACTGTGCCGATCAGGCACCCTTCAGGAAAGCCAGGGTTTCCGTACGTGCAAGATCAGATGCTCCTCTGATAAGCGATGGCTGTCAATGGAGGAAATATGGTCAAAAAATGGCAAAGGGTAACCCTTGTCCTCGTGCTTATTATCGTTGCACTATGGCTGTAGGATGCCCAGTTCGTAAGCAGGTGCAAAGGTGTGCGGAGGACAAGGGAGTGCTGATGACAACCTACGAAGGAAATCACAATCACCCTCTTCCTCCGGCGGCCACCGCCATGGCCAACACGACGTCGGCTGCGGCAGCGATGCTCCTGTCTGGTTCAAGTTCAAGTACAGGCAAGGAAGGGTTAACAAACTCTGCAGGATACTTCTCTTCACTGCCCTACCCCTACGCATCAATGGCAACCCTATCAGCCTCCGCACCATTCCCCACTATCACCCTGGACTTGACCCAAAACCCCAACGCCATGCAGCTGCAACGAGTACAGCCCTCTGGGCCCGCATTTTCTATGCCAATATTTCATGGGTATCCGCAGGCACAGCTAATAGGGCATCCCATTTTGTTCCCGCAGAAGCTTCAACTGGGGCAAAGGCAGCCTTTGGCTATGGTTGAGACGGTGAGTGCAGCCATCGCTTCTGATCCCAATTTCACTGCAGCACTAGCAGCTGCAATCTCATCCATCATTGGAGCTTCCAGAGGCAGTGATGCAAGTAATAATATTAATAACACTGGTGCTAGTACTACCAGCGCTATAAATATGCCAAATAATCCCTTTAACGGGATATCTGTGTTGCCCGTCTCCCCACAGCTTCCTCAGTCATGCACTACACTCTCCACCAACTAA 1746 0.4943 MIPMTLSLASKSVRLGPAIQWGPPILTTVTNSRACNWVDLRRPPHVAATTLLLTTMDHNQHAPRELTLVSSDDFLRRDSNRITEDQGRYNDAPIKELDFFSSSGNKISSNDHAPRHKDHDRRDRMGYSDGSTPCIDRPVNTGLNLTGGSSRMLRATSDENPNAELSTIQGELRRLHEENRKLRTMLDQITKSYSQLQAQLFITLQKQKPLQVEANGVMSEKQYMEPRPSTNLDINDASVSDDKTQELSVSAPSNNAEVLSKQRDLHVTKRLGKRACPEDGFDLSSQSWGSSKSPKLQESKRDDCADQAPFRKARVSVRARSDAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKGVLMTTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSSSSTGKEGLTNSAGYFSSLPYPYASMATLSASAPFPTITLDLTQNPNAMQLQRVQPSGPAFSMPIFHGYPQAQLIGHPILFPQKLQLGQRQPLAMVETVSAAIASDPNFTAALAAAISSIIGASRGSDASNNINNTGASTTSAINMPNNPFNGISVLPVSPQLPQSCTTLSTN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0414 581 Pfam WRKY DNA -binding domain 328 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0414 581 MobiDBLite consensus disorder prediction 110 127 - -
Dere02g0414 581 Coils Coil 165 199 - -
Dere02g0414 581 ProSiteProfiles WRKY domain profile. 321 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0414 581 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 156 543 IPR044810 GO:0003700
Dere02g0414 581 Gene3D WRKY domain 311 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0414 581 MobiDBLite consensus disorder prediction 281 307 - -
Dere02g0414 581 SUPERFAMILY WRKY DNA-binding domain 319 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0414 581 MobiDBLite consensus disorder prediction 100 146 - -
Dere02g0414 581 FunFam probable WRKY transcription factor 31 311 388 - -
Dere02g0414 581 SMART WRKY_cls 326 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0414 Dere-ChrDere02 4145316 4148436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0414 64 581 WRKY Transcription Factor Family AT4G01720 41.822 2.21e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g0414 WRKY 1.5e-23 CL0274