Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0403 ATGACGGCGAAGCTGATTTTGACAGCCCTTGGTTTTGCTTGCTTCATTTCTGGGGTTATCTCCAGTGGATCTGAGACACATTCTGTGTTTTCTTACTTAGAGAATGATATCGTCGCAGCAAAATCTTCCTCTTTGCCTAAGCCTCTCTTGGTCGCCCTCACTCTTATTCAAGGAGCTGCTTCTAAAGGAGCCGTCTGTTTGGATGGGACACTGCCTGGCTACCACTTGCATCGTGGGTTCGGATCTGGTGCAAATAGTTGGCTCATTCAACTGGAGGGTGGAGGGTGGTGTAATACCATCAAGAGTTGTGTTTTTAGAAAAACCACTCGTCGCGGTTCCTCAAAACACATGGAACAGCAAATACAATTCACAGGAATTTTAAGCAATAAAGCTGAAGAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAATTACGGTACTGTGATGGGGCATCTTTCAGTGGAGACAGTCAGAACGAGGCTGCACAACTTCAATTTCGAGGACAAAAAATCTGGCTGGCTGCTATGGAGGAGTTAATGTCCAAGGGAATGCAGAATGCCAACCAGGCTCTTCTCTCTGGATGCTCTGCAGGTGGCCTGGCATCCATAATACATTGTGATGAATTCCGGGCCTTGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTTCTTGATGCAATTGATGTATCTGGGGGACGCACATTGAGGAATCTGTTTCAAGGAGTTGTTCAATTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTTGACAAACTGGATCCAACTTCGTGCTTCTTTCCTCAGCATTTAATAAACCATGTTGGGACCCCGTTGTTTCTACTCAATGCAGCCTATGATGCATGGCAGCTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCCCAGGGCTCTTGGAATAACTGCAAATCAAATCATGCAAATTGTAATTCATCTCAAATTCAGTTCCTTCAAGATTTCAGAAATCAAATGCTTAATGCTGTGAATCGGTTCTCAATGTCATCTCAAACTGGATTATTCATAAATTCTTGTTTTGCTCATTGCCAATCTGAGAGACAGGATACATGGTTTGCTGATGATTCTCCCCTAATAAAGAACATGCCTATTGCAATTGCTGTTGGAGACTGGTATTTTGATCGACAAGTTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACAACACTTGCCATAATCTGGTCTTCAATGACCATGGATCTAGCCGAGTAAGCTCACAGTCAACAAGTGATATATTTTCCATGGTAGATCCCCAGTCCACGAGTGATGATACAACTGCCATGGTATACTCCTACTCCCCGAGGTTGACTTTGACTCCTCTGTATATGCTAACCGTCAACTGCCTTGTTGCCAATTACATGTTCCTAATGCAATGTGGAGAGCATATTTGTGTCCCTGTTTAA 1455 0.4351 MTAKLILTALGFACFISGVISSGSETHSVFSYLENDIVAAKSSSLPKPLLVALTLIQGAASKGAVCLDGTLPGYHLHRGFGSGANSWLIQLEGGGWCNTIKSCVFRKTTRRGSSKHMEQQIQFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSKGMQNANQALLSGCSAGGLASIIHCDEFRALFPKSTKVKCLSDAGFFLDAIDVSGGRTLRNLFQGVVQLQEVQKNLPKSCLDKLDPTSCFFPQHLINHVGTPLFLLNAAYDAWQLQASLAPPSADPQGSWNNCKSNHANCNSSQIQFLQDFRNQMLNAVNRFSMSSQTGLFINSCFAHCQSERQDTWFADDSPLIKNMPIAIAVGDWYFDRQVVKAIDCAYPCDNTCHNLVFNDHGSSRVSSQSTSDIFSMVDPQSTSDDTTAMVYSYSPRLTLTPLYMLTVNCLVANYMFLMQCGEHICVPV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0403 484 PANTHER NOTUM-RELATED 49 410 IPR004963 GO:0016787
Dere02g0403 484 Pfam Pectinacetylesterase 48 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0403 Dere-ChrDere02 4057212 4062533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0403 15 414 Carbohydrate Esterase AT2G46930 69.154 0.0 600
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3583 01 50180810 50184142 Dere02g0403 02 4057212 4062533 CCT
Dere01g3615 01 50416256 50420396 Dere02g0403 02 4057212 4062533 ECH
Dere02g0403 02 4057212 4062533 Dere01g3615 01 50416256 50420396 ECH
Dere02g0403 02 4057212 4062533 Dere02g0403 02 4057212 4062533 ECH