Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0400 ATGCTAAAATGGGTTCCTGTCTTTGTTTCTGATGTGTTCCATTCACTGAATTTGGGGCTTATAGATCTGTGTGTGGATGTGCTCGATCCACCGCATCATTCGTATTTTAAGCACTACCGACAAGGGTCAGGGGTATTTGCAATAATGGGTAACGGAACTTCTCGTGTTGTTGGCTGTTTGGTGCCCTTTAATGGCAAAAGCGGGGTTGATTTGGAGTTTCTAGAGCCATTAGACGAAGGATTAGGTCATTCTTTCTGTTATGTGAGGCCATCAATTTTTGAATCTCCTGCCATCACCCCATCAAACTCCGAGAGGTTCACTGTTGATTCAAGTACCCTGGATTCTGAAACGTTGAGTGGATCGTTTAGACATGAAAGCATAGAAGATTCCTCTGGCATACACAGAACTGGTAAGAGCTTCCCGGAAACCACATTCAAAACAATTTCAGGAGCTTCAGTCAGTGCCAATGTTGCAACAGCAAGGACTGGTAACCAGAGTGCATTATTTGCCAGTGATGTCCAAGAGCCTGCTGCATCCTTTGAGGGAACATCCTCATTTGCTGCAATCCCTTTACAGCCAGTTCCCCGTGGTTCTGGACCTTTAAATGGCTTCATGTCAGGACCTCTTGAGAGAGGATTTGCTTCAGGTCCATTGGACAAGGGCGGTGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGTCCTCTTGATGCCACAGACAAATCCAACTTTTCTGCACCACTTGCACGTGGTCGTCGAAGGCCACGCCTACAACACCTCATGAGAAGTGTGAGTGGACCAATGAAAAACACACTCTCTCGGACCTTCTCTAAGAATTCTATGGGTGGTAGTTGGATGCAGCGGTTATTCTTTCACCCAATGACCCAATTGGCCTGGCATTCGAGAGATGCAAAGTTTCGACCTGAAGTTTCTAGAAACTGTATTGAAGTTGGACCATCTGAAGGGGAGATTAAGCATCCACACAACTTGCAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGATGGTTATTTATTGGTATATATGATGGATTTAGTGGACCTGATGCGCCTGAATTTCTGATGAGCCATCTTTATAGATATATAGACAAGGAATTGGAAGGGTTGCTTTGGGATTATGAAGATAGTCCTGTAGTTCCACTTAAACCTGAGGCCACTAGGCCAGGAAATACTGTTCCGACTCCAGGACAGTGCAAGACGGAACTTTCAGAGATCCACGCTGATTCAAATAAAAAAAGCTCTTGCTGTTCGCAATCTTCTTCTGGTCCAGTAATTGTTGTGAATTGTTCATCAAACAGTGAGATAGTTGATGACAATGTTGAAGTGAAGGTGAATGTTGAATGCCAATCCCCTCATCACACAAGTCCTGATATATCAGGTACTGTTCGTGCTTCTGTTTCACTTGGACAATTGACTGGACAAGGTAGAAAAAGCGTACGGCTTTATGAGCTACTTCAGATTGAATCCTGGGATGAGCAGGGTTTCTTGTTAAACTCTGAACAAGGTAAGGATTCTTCAGTTCCTAGGGAATCAACACTAGTGGGACAGATGAGATCTCCTAATGCAAAAGAAGATAGTTCTAGACCTCAAGATGAAGGTCCCACCACATCAGGAGAAAATGGAGGCATCGGTTTTGAATCAATTAACCAGAAGTCTGCTGCTGCTTTTTCTGTATCTGGACAAAGGCAAAATTCAAGAAAGGCATCAATTGGTACGAAAATAAAAAATATGTATAGGAAGCAAAAGTCTTTGCGTAAGAAATTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACATGTTTTGATGATAAAGTAGTTGAAACCTCAGGACCCATTAGAAAATGCAAATCTGGAGTAGTTGATCATAATGGAGTTTTAAGAGCGATGGCTCGAGCTCTTAAAAGAACAGAAGAGGCATACATGGAAATGGTGGAGAATAATCTGGGCAAAAATCCAGAGCTTGCTCTGATGGGATCTTGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGGGTAATTTTGGCTCAAGAAAGACCAAATGATCGTCATTCTAATCCAACTTTTGTCAAAGATGACATGAGGTATAAAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTGGATAGAATTTCAGAGGAGTCCCCGATTCACAACCAAAACAGTCAGCTTAACAAGACGAACAAAAATAGAGAGATATCTGTTTGCAGATTAAAAATGAGGGCTGTTCAGCTTTCCACTGATCACAGCACAAATATTGAGGAGGAAGTTTCTAGAATAAAGGCAGAACACCCTGATGATGATCAATCCATATTAAATGATCGAATCAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCTTCTTTTAATGAAGCTCTGCTGGAGATGTTTCAAGTTGATTACGTGGGCACTGCTCCTTATTTAAGTTGCACTCCTTCTATTCTTCATCACCGGCTTTCCTCTAGTGATCGTTTCTTGGTACTCTCTTCCGATGGGCTTTACCAGTACTTCAGCAATGAAGAAGTGGTTGCCCATGTTACTTGGTTCATGGAAAATGTACCTGAAGGTGATCCTGCACAATACCTCATTGCAGAGCTTCTCTTCCGTGCTGCCAAAAAGAATGGAATGGATTTTCACGAATTGCTTGACATTCCTCATGGAGATCGGCGCAAATATCATGATGATGTTTCGGTAATGGTGGTTTCCCTGGAGGGAAGGATTTGGAGATCATCTGGATAA 2844 0.4272 MLKWVPVFVSDVFHSLNLGLIDLCVDVLDPPHHSYFKHYRQGSGVFAIMGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEDSSGIHRTGKSFPETTFKTISGASVSANVATARTGNQSALFASDVQEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPRLQHLMRSVSGPMKNTLSRTFSKNSMGGSWMQRLFFHPMTQLAWHSRDAKFRPEVSRNCIEVGPSEGEIKHPHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPEFLMSHLYRYIDKELEGLLWDYEDSPVVPLKPEATRPGNTVPTPGQCKTELSEIHADSNKKSSCCSQSSSGPVIVVNCSSNSEIVDDNVEVKVNVECQSPHHTSPDISGTVRASVSLGQLTGQGRKSVRLYELLQIESWDEQGFLLNSEQGKDSSVPRESTLVGQMRSPNAKEDSSRPQDEGPTTSGENGGIGFESINQKSAAAFSVSGQRQNSRKASIGTKIKNMYRKQKSLRKKFFPWSYDWHREETCFDDKVVETSGPIRKCKSGVVDHNGVLRAMARALKRTEEAYMEMVENNLGKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHSNPTFVKDDMRYKNRSRESLVRMELDRISEESPIHNQNSQLNKTNKNREISVCRLKMRAVQLSTDHSTNIEEEVSRIKAEHPDDDQSILNDRIKGQLKVTRAFGAGFLKRPSFNEALLEMFQVDYVGTAPYLSCTPSILHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0400 947 SMART PP2C_4 325 936 IPR001932 -
Dere02g0400 947 CDD PP2Cc 644 938 IPR001932 -
Dere02g0400 947 MobiDBLite consensus disorder prediction 517 541 - -
Dere02g0400 947 Coils Coil 645 665 - -
Dere02g0400 947 SUPERFAMILY PP2C-like 338 939 IPR036457 -
Dere02g0400 947 PANTHER PROTEIN PHOSPHATASE 2C 327 937 IPR015655 GO:0004722|GO:0006470
Dere02g0400 947 Pfam Protein phosphatase 2C 763 909 IPR001932 -
Dere02g0400 947 MobiDBLite consensus disorder prediction 517 563 - -
Dere02g0400 947 MobiDBLite consensus disorder prediction 549 563 - -
Dere02g0400 947 ProSiteProfiles PPM-type phosphatase domain profile. 325 938 IPR001932 -
Dere02g0400 947 Gene3D - 305 462 IPR036457 -
Dere02g0400 947 FunFam Protein phosphatase 2C 32 302 470 - -
Dere02g0400 947 Gene3D - 568 944 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0400 Dere-ChrDere02 3997960 4004032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0400 49 947 PP2C-type Phosphatase Gene Family AT2G46920 64.459 0.0 1137