Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0370 ATGTTTCACTTATCCATATCAAGATTCAAAATGGACTATCGGTGGACCAAGGGTAGGCAGGAAACTGGTGCTCGTGACAGGAGGCAATTTGGAAAGGAGCAGGCATATCAAGACTCCATCATTGAGGATCTCACGGAGGATTTTCGATTGCCAATCAACCAAAGGCCTACAGAAAATGTTGATCTGGATAATGTGGAACAAGCATCACTAGACACTCAGTTAACATCCTCAAATGTTGGTTTCAAGCTTCTCCAGAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAGCAAGGAATTATTGAACCAATAAAATCTGGGATCAGAGACCCAAGATTGGGGGTAGGTAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATATCCAGCGAAAAAAACTTGATGTTGAGTTAGAGGAGACAGAGGAAAATGCAAGGAAGCGGGAGGTATTAGCAGAACGTGAGCAAAGAATTCAAACTGAGGTTAAAGAAATACGAAAAGTATTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCAATGGAATTTGAAGCACACCTGAGCTCGTATGATCACAATCACAGAAAGCGCTTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGCCGGGATGATAGGCAAAAGCGAGAACAGCAACGTCAAGAAAGAGAAATGGCTAAGTTCGCTCAAATTGCTGATGCTCAGAAGCAACAACAGCTTCAACAGCAACAAGAAGAATCTGAGCCTGCTCCAGTTTCCTCTGAATCTAGAACTGCTACTGCACTTGCTGATCAGGATCAGCGGAAGACTCTGAAGTTTGGGTTTTCTTCTAAAGGCGGTGGTGCTTCTAAGAGCTCATTTGGTGGATCTGCAAAGAAGCAAAAAGTTGCCATATCCTCTATATTCGGCAACGATACTGATGAAGAATAATACCGTGATTCAGGAATTCTATTTTTTGGCCGAAAGATTCAGGCATTGAATTTTACTGAAAATCACCCCGGCTCCACTCGTACGTACTGCCAGTCCAGATCTCTATCATCCATCTCCTGTGCTGAGCCTATGGCTTACATGTTCGTTTTCCCATTTTCTTGTGTCTATGATGGTCTTGGGTGCGCCGATGTTGATATGAAAGTGATTAGGGTAGGTCTATCGGGTTAG 1167 0.425 MFHLSISRFKMDYRWTKGRQETGARDRRQFGKEQAYQDSIIEDLTEDFRLPINQRPTENVDLDNVEQASLDTQLTSSNVGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEENARKREVLAEREQRIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQQLQQQQEESEPAPVSSESRTATALADQDQRKTLKFGFSSKGGGASKSSFGGSAKKQKVAISSIFGNDTDEEXYRDSGILFFGRKIQALNFTENHPGSTRTYCQSRSLSSISCAEPMAYMFVFPFSCVYDGLGCADVDMKVIRVGLSG 388
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0370 388 Pfam G-patch domain 77 117 IPR000467 GO:0003676
Dere02g0370 388 Coils Coil 126 153 - -
Dere02g0370 388 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 11 312 - -
Dere02g0370 388 ProSiteProfiles G-patch domain profile. 76 121 IPR000467 GO:0003676
Dere02g0370 388 Pfam Zinc-finger double-stranded RNA-binding 171 198 IPR022755 -
Dere02g0370 388 MobiDBLite consensus disorder prediction 235 266 - -
Dere02g0370 388 ProSitePatterns Zinc finger C2H2 type domain signature. 173 195 IPR013087 -
Dere02g0370 388 SUPERFAMILY beta-beta-alpha zinc fingers 150 206 IPR036236 -
Dere02g0370 388 MobiDBLite consensus disorder prediction 197 232 - -
Dere02g0370 388 MobiDBLite consensus disorder prediction 197 266 - -
Dere02g0370 388 SMART G-patch_5 74 119 IPR000467 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g0370 Dere-ChrDere02 3701571 3710343 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0370 11 312 C2H2 Transcription Factor Family AT5G26610 69.408 7.53e-132 378