Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0365 ATGGGCGGAGGTGGAGCGACGACTTCGTACGCGGAGGCACAGCACGCCTCGGCCAAGACGTCGGTGTGGTGGGACATAGAGAACTGCCCTGTTCCCAAAGGTTGTGATCCGCACTCCATCGCCCAGAATATAAGCTCTGCGCTTGTTCAGATGAACTATTCTGGGCCCGTTTCCATCTCCGCCTATGGTGATACTACCCACATCCCATCCGCTGTACAGCACGCGCTTTCAAGTACAGGAATCTCCCTCAACCATGTCCCAGCTGGCGTTAAAGACGCAAGCGATAAGAAGATTCTTGTGGACATGTTGTTCTGGGCCGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCTGGTGATCGAGACTTCTCTAATGCTCTTCATCAATTGAGGATGAGGAGATATAATATTCTTCTCGCACAGCCTCAGAAAGCATCTGCACCGCTTGTTGCAGCCGCTAAGAGTGTATGGCTTTGGACTAGTCTCGTAGCTGGAGGACCTCCTCTAACTAATGGCGAATCACAACCACATGGTAATAATAGCCTCCTATCGTCCTCTGACACCTCACAAATTCCGGTCTCCAATGCTGTACAGATGAAGCAACACGTGGATTCTTATTCTCGAGTTCATACAGAAAACCAGAAACTCCCAAATGCAGGAAGGGGTTTTGATTCTAGATATCAAGGGAAAACACATCGGAGAAACACAAGTCAACCAATTGCACCAAAACCAATGAATCTACCAGCCGGACTACAAGATAATCGTAAAAGTATAAACTCTTATCGTCCTGACAACCATAACTCAAGTGTTCCTCCTAGTGGATCTGCTCCTAATTGTGTTCATGCCAGAACTGATCAGATGTGGGGCAATAATGGTAATCTACAGGGAAATAATCAAAAACCTTATTCACAGTCCTTAAGACCGAATGGTTTTCCATTGCAACTTGCTATTTCACCCAGTGATTCATATCCACCTAATTCACATACCTTTACAACTTCAATAGTGCCTCCAAGCACTAGTGGACTCAATTTCACCTCAGGAACTCATGCTCATCATTTCCATTCTGTTCAACAACGGAGTGGAAAGCTGAAACAGAATCCTAACCACAATGCTCCACAACCTGTAAGGTCAACTGGCAAACAAAGTGGCCATATGGTGCATGGCACACAATACCATGGTTACCCTCATAGTCCAGAATACCCCCCTACTTTGGCAGCAATGGGTAATAATAACCTTCCAGGTAATAATATGTGGGGATCTCCCGGATGCCCTAAACCCTCTGAATATGTCCAAGGCCTTATAGGGATTGTATTACTTGCATTGAACACACTTAAAAATGAAAAGATTATGCCAACTGAGGCAAATATAGCTGATTGCATTCGTTATGGAGATCCAAAGCACCGCAACACTGATGTTAAGAAGGCTCTGGAGAGTGCTATTGAACAGCAGATGGTGGTGAAACAGAATTTAGGTGCTCTGCAGTTTTATGTTGGTAAGAATGATAAACTTTGGGAGTGTGCAAACCCCGTAAGTGGTGATCCAAATCAGCTAACAAAAGAAATTTGGGATGAAATGAAAAAATTTATATCTACTCCTTTTGGAAGATCAGCTATAATGGGTACTCAGTGCAAGTATGAAGCAGCTATGCTGATGAAGAATATGTGCTTAAAAGATCATGCTTTGGGTGATGTCCTTCAGATGTTGAACTTGGTGATTACCCATAAAAAATGGATTGTGAATCATAAGTCAGGTTGGCAGCCACTTAAAATTACTCTTACTGAGACCAGCTCTGGTTCAGGGTCATAG 1809 0.4395 MGGGGATTSYAEAQHASAKTSVWWDIENCPVPKGCDPHSIAQNISSALVQMNYSGPVSISAYGDTTHIPSAVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLVAGGPPLTNGESQPHGNNSLLSSSDTSQIPVSNAVQMKQHVDSYSRVHTENQKLPNAGRGFDSRYQGKTHRRNTSQPIAPKPMNLPAGLQDNRKSINSYRPDNHNSSVPPSGSAPNCVHARTDQMWGNNGNLQGNNQKPYSQSLRPNGFPLQLAISPSDSYPPNSHTFTTSIVPPSTSGLNFTSGTHAHHFHSVQQRSGKLKQNPNHNAPQPVRSTGKQSGHMVHGTQYHGYPHSPEYPPTLAAMGNNNLPGNNMWGSPGCPKPSEYVQGLIGIVLLALNTLKNEKIMPTEANIADCIRYGDPKHRNTDVKKALESAIEQQMVVKQNLGALQFYVGKNDKLWECANPVSGDPNQLTKEIWDEMKKFISTPFGRSAIMGTQCKYEAAMLMKNMCLKDHALGDVLQMLNLVITHKKWIVNHKSGWQPLKITLTETSSGSGS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0365 602 MobiDBLite consensus disorder prediction 253 276 - -
Dere02g0365 602 MobiDBLite consensus disorder prediction 170 189 - -
Dere02g0365 602 MobiDBLite consensus disorder prediction 353 390 - -
Dere02g0365 602 PANTHER LIMKAIN B LKAP 13 488 IPR024768 GO:0005777|GO:0010468
Dere02g0365 602 Pfam OST-HTH Associated domain 543 597 IPR025677 -
Dere02g0365 602 MobiDBLite consensus disorder prediction 353 386 - -
Dere02g0365 602 MobiDBLite consensus disorder prediction 212 310 - -
Dere02g0365 602 Pfam NYN domain 19 155 IPR021139 GO:0004540
Dere02g0365 602 CDD PIN_limkain_b1_N_like 19 143 - -
Dere02g0365 602 MobiDBLite consensus disorder prediction 285 310 - -
Dere02g0365 602 MobiDBLite consensus disorder prediction 173 189 - -
Dere02g0365 602 Gene3D - 10 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0365 Dere-ChrDere02 3641171 3643693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0365 9 259 C2H2 Transcription Factor Family AT5G61190 59.843 1.25e-84 283