Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0344 ATGACAGCTAAAATGTTTTCCTTTCTTTCATCCTCGCACTCTCGTTCATCCCAAGAAAGCTCAGAGTCTCAGACTCACCGACCTTCTGATCCCTTTTCGTCTTGGTTTATGAGCTCGAAGGAGAAACCCACTTTAGGCGGTACGCGGATTAAGACCCGCAAACGGAATATTGCTGCACCACTGGACCCTGCAGCATTCTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGATTATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGATACTTTTTTCGAGGTTGTTTTTACTGGCGGGCGTACACAACCTGGAACAACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTATAATAGAGAGTGAACCAAAGCGTGAAGTCATCTTACCATCTGTAATCTATATACAGAAGATTTTAAGGCGAAGGCCGTTTCTCATCAAGAACCTTGAAAATGTTATGCGAAGATTCTTGCAGTCATTGGAGCTTTTTGAAGAAAATGAGAGGAAGAAGTTGGCAATTTTTACTGCACTGGCATTTTCCCAGAAGCTATCTGGTCTTCCACCAGAGACTGTGTTTCAGCCACTTCTCAAAGATAATCTTGTGGCCAAAGGACTAGTTCTGTCATTTATAACTGATTTCTTTAAGGAATATCTGATTGACAACAGCCTTGATGATCTTATTTCAATTCTGAAACGGGGAAAAGTGGAGGACAATCTTTTGGACTTCTTTCCCCCGGCAAAAAGATCTGATGAAGCTTTCTCTGATCATTTCAACAAGGAAGGACTGGTAGCTTTGGTGGAGTATAATGAGAAGAAGATATTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTAACAACACAGATAACAGAGGAGACTGATATATCTGAAGTCATTGAAACTGTAAAACTGCGTGTTAGAGATGCTAAATTGCCCGATATTGATGTTGTGCGGGTTTTATGGGATGTCTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAACAACAAAATGCAAATGCAGCCCTGCGCCAGGTAAAAACTTGGGCAGAACTGTTGAATACTTTCTGCACCAATGGGAAACTTGAGTTAGAACTGATGTACAAAGTACAGATGCAGTGCTATGAGGATGCAAAGCTGATAAAGTTGTTCCCAGAGATTGTCAGGTCTCTTTATGAACAGGATGTGCTGGCCGAGGATACAATCCTTCATTGGTTCCAAAAAGGGACAAATTCCAGGGGCAGGCAAACCTTTGTGAAGGCTCTGGAACCATTTGTTAACTGGCTGGAGGAGGCGGAAGAGGAAGAATAA 1344 0.4241 MTAKMFSFLSSSHSRSSQESSESQTHRPSDPFSSWFMSSKEKPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKIIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIESEPKREVILPSVIYIQKILRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLIDNSLDDLISILKRGKVEDNLLDFFPPAKRSDEAFSDHFNKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEETDISEVIETVKLRVRDAKLPDIDVVRVLWDVLMDAVQWSGKNQQQNANAALRQVKTWAELLNTFCTNGKLELELMYKVQMQCYEDAKLIKLFPEIVRSLYEQDVLAEDTILHWFQKGTNSRGRQTFVKALEPFVNWLEEAEEEE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0344 447 CDD W2_eIF5C_like 252 440 IPR043510 -
Dere02g0344 447 MobiDBLite consensus disorder prediction 1 49 - -
Dere02g0344 447 ProSiteProfiles W2 domain profile. 282 447 IPR003307 GO:0005515
Dere02g0344 447 FunFam ARM repeat superfamily protein 279 447 - -
Dere02g0344 447 Gene3D - 279 447 - -
Dere02g0344 447 SMART 542_3 361 446 IPR003307 GO:0005515
Dere02g0344 447 Pfam eIF4-gamma/eIF5/eIF2-epsilon 374 447 IPR003307 GO:0005515
Dere02g0344 447 Coils Coil 157 177 - -
Dere02g0344 447 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 38 447 - -
Dere02g0344 447 MobiDBLite consensus disorder prediction 1 41 - -
Dere02g0344 447 SUPERFAMILY ARM repeat 289 444 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0344 Dere-ChrDere02 3387160 3395901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0344 336 443 Eukaryotic Initiation Factors Gene Family AT2G34970 30.909 1.41e-08 55.1