Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0332 ATGGTTTCATTATCAAGTGTTTCCTTGTTTCCCTTGACCACGCAAAACGGTGTCTCTCGATCGACAAAATTTGCGGCTGCCGATGCAAGGACGACAAGTCCATTCTATATTAGGCCGAGCAACGAGCATAGAAAGGTTGTTTGTGCTTGCGTGGCTTCTCCGCGAAACTTGAAGAGCGATGAGTCGTCGGCAATTAAATTTAATGGTTCTTCTGAATCAGAACACTTACACACTATAAGGGATCCCGAGAATGATTCCGACGTACTTATTGAGTGTAGAGAAGTCTATAAGTCTTTTGGGGAAAAGAAAATCCTAAATGGTGTGAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTGCTCCAGACAAGGGAGAGGTCTATATTCGAGGAAGAAAGAGAGCAGGTTTGATAAGTGATGAGGAGATATCAGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCTCTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCTCGCATGTCTGAGGATCAAATTTCAGAGCTTGTCAAGGAAAGCCTGGCTGCAGTTGGATTAAAGGGTGTTGAGGATCGGCTGCCATCTGAGTTGTCTGGTGGGATGAAAAAACGAGTTGCCTTAGCTCGGTCTATTATTTATGACACTACAAACGATTCAATAGAACCAGAGGTGCTCTTGTATGATGAACCTACTGCTGGACTTGATCCCATAGCTTCTACTGTAGTTGAGGATCTGATACGCTCTGTCCACATAAAAGGACGTGATGCTCTTGGGAAACCTGGAAAGATTGCATCTTATGTAGTTGTCACTCACCAACATAGTACCATCAAAAGAGCTATTGACAGGTTGTTGTTTCTACACAAGGGTAAGATTGTCTGGGAAGGAATGACTCATGAATTTACTACATCAACAAATCCAATTGTTCAACAGTTTGCATCTGGTAGTCTGGATGGTCCTATCAAATATTAG 1053 0.4236 MVSLSSVSLFPLTTQNGVSRSTKFAAADARTTSPFYIRPSNEHRKVVCACVASPRNLKSDESSAIKFNGSSESEHLHTIRDPENDSDVLIECREVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSRMSEDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTNDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 350
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0332 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Dere02g0332 350 Gene3D - 76 342 IPR027417 -
Dere02g0332 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 5 350 - -
Dere02g0332 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Dere02g0332 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Dere02g0332 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 331 IPR027417 -
Dere02g0332 350 SMART AAA_5 114 318 IPR003593 GO:0016887
Dere02g0332 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g0332 Dere-ChrDere02 3316351 3322594 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0332 96 334 Calmodulin-binding Proteins AT2G36910 28.740 3.21e-15 75.1