Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0321 ATGTTGAAGCTGTCGGCCGTGCCCAGTCAAAGATACATTAACATTAAAGTCTGGGAATTCAACACTTTTGACATTGGATTTGAAACGTATGTGCATACTACCGTATATTACCTGAACTCTCATCTCTCGCCGAAGACATGTTCATGGTCCATGGAGCTTTCTTTCTTCTACATTCTGCTTGTGGGTGTGCTTTCTCAACCACTCTACTGCTACTCCCAACAAGTATACCTCAACAACACCGTCTATGACTGCTCTGCCAACCCTTCTGCCCCAAAAGGATATCTCTGTGATGGCCTCCAAAAGTCATGCACCTCCTTTTTAACTTTCAGGTCAAAACCCCCTTATGACACCCCTCTAAGCATCGCCTACCTTCTTGGCTCCGATGCATCTTCCATCGCCGCTGTCAACAACATCTCAAACAATGATCACAACATTCCTTCCAATCAAACTGTAATTGTTCCTGTCGAGTGCTCTTGTGCTGGCAACATCTACCAGCATGTCACCCCTTACACCGCAAGGAAGGCCGACACCTACTTTAACTTGGTCAAAGCAACTTATGAAGGCCTCACCACTTGCCAGGCGTTGATGGGTCAAAACTATTATGCCCCTGTTAGTATTCCGGTGGGTGCACAGCTCACAGTTCCGGTCTTATGTGCTTGTCCCACTGCTAAACAGACCACAGATGGGGTCTCCTCCTTGCTGGTTCACACCGTCAACCTCGGGGATACACTTGACTCAACCGCACAAGCCTTCGATGTGGATGTACGCACTCTGCTTACCGCTAATCAATTGCCTGCAAATTCCACCCTCTCTGCCTTCACCCCTTTATTACTTCCCCTCCCATCCTCCGCTTGCAAACTCAATCCGCATACTTTCTATTGCCCCTGTTCCCACTCCCGGGGTTCGCTTCCATCTCTCGATTGTGATCAAACTGCTGCTCATCATTTCCCTCTCAAATTGGTTGTTTCCTTAGGAGTTGGCATGGGTGCTGGATTTCTATGCTTATTTCTTTTGGGTTACAAGTTGCATCAGTGCCTAAAACAAAAGCAAGAGAGAGTTCGCAAGGAAAAATTGTTCAGGCAAAACGGTGGCCTCTTGCTACAAGAAAAAATGTCATGCTACGGAAACAGAGAGAAAGCAAAACTTTTTTCGGCAGGGGAACTGGAAAGAGCAACAGATAACTACAACCAGAGTAGGTTTCTTGGTCAGGGTGGGTATGGCACCGTTTACAAAGGAATGCTGCCAGATGGTAGCATCGTTGCAGTTAAGAAGTCAAGAGAAATTGTGAGAAACCAGATTGAGACTTTCATTAACGAAGTGGTGATTTTATCCCAAATAAATCACAGGAATATCGTCAAACTCCTAGGTTGTTGCCTGGAGTCTGAGGCCCCATTACTTGTGTATGAATTTATTCCCAATGGAACCCTTTCCCACCACATCCATAAGCCGGAACTTAAGTCGAATCTTTCATGGGAAAGCCGCCTTAGAATTGCTTGTGAGGTTGCTGGAGCAGTGGCCTATATGCATTTTGCAGCTTCTATTCCCATCTTCCACAGAGACATTAAAACTTCCAACATACTCCTGGACCATAAGTACAGCGCCAAAGTGTCCGATTTTGGGACTTCCAGATCAGTCCCACATGACAGGACCCACTTAACTACAGCAGTTCAAGGCACCTTCGGGTACATAGATCCTGAATACTTCCAGTCCAGCCAATTCACTGATAAAAGTGATGTATACAGTTTTGGGGTTGTACTTGTAGAGCTCATCACTGGAAGAAAACCCATTACCTTCTCAGACGAAGATGAGGGTCAAAATCTTGTTGCAGAATTCATTTCCTTAATGAAGAAGAACCAGGTTTTTGAGATAATAGATGCCAGAGTTGTTCGTGAAGCTAGGAAAGATGATATTCTTGGCATTGCGAATCTTGCAATGAGATGCTTGAGACTCAATGGGAAGAAGAGACCCACAATGAGAGAGATTTCAGCAGAGCTAGAAGCATTGAGAAAGGCACAAAATTCCTTAGAGATCACCCCATGTCCTCCTGAGTTACCAGATGATAGAAAATCAGCTAGGCACAACACTTATACTTGTGAAACGGTCCATGATTACACAGAGGAAAGCATGTTGATATCCTTACAATCAGACTCCACATCTGTCTGA 2163 0.4512 MLKLSAVPSQRYINIKVWEFNTFDIGFETYVHTTVYYLNSHLSPKTCSWSMELSFFYILLVGVLSQPLYCYSQQVYLNNTVYDCSANPSAPKGYLCDGLQKSCTSFLTFRSKPPYDTPLSIAYLLGSDASSIAAVNNISNNDHNIPSNQTVIVPVECSCAGNIYQHVTPYTARKADTYFNLVKATYEGLTTCQALMGQNYYAPVSIPVGAQLTVPVLCACPTAKQTTDGVSSLLVHTVNLGDTLDSTAQAFDVDVRTLLTANQLPANSTLSAFTPLLLPLPSSACKLNPHTFYCPCSHSRGSLPSLDCDQTAAHHFPLKLVVSLGVGMGAGFLCLFLLGYKLHQCLKQKQERVRKEKLFRQNGGLLLQEKMSCYGNREKAKLFSAGELERATDNYNQSRFLGQGGYGTVYKGMLPDGSIVAVKKSREIVRNQIETFINEVVILSQINHRNIVKLLGCCLESEAPLLVYEFIPNGTLSHHIHKPELKSNLSWESRLRIACEVAGAVAYMHFAASIPIFHRDIKTSNILLDHKYSAKVSDFGTSRSVPHDRTHLTTAVQGTFGYIDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPITFSDEDEGQNLVAEFISLMKKNQVFEIIDARVVREARKDDILGIANLAMRCLRLNGKKRPTMREISAELEALRKAQNSLEITPCPPELPDDRKSARHNTYTCETVHDYTEESMLISLQSDSTSV 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0321 720 SUPERFAMILY Protein kinase-like (PK-like) 379 665 IPR011009 -
Dere02g0321 720 ProSiteProfiles Protein kinase domain profile. 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0321 720 CDD STKc_IRAK 401 668 - -
Dere02g0321 720 Pfam Protein kinase domain 395 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0321 720 Pfam LysM domain 236 279 IPR018392 -
Dere02g0321 720 Pfam LysM domain 116 154 IPR018392 -
Dere02g0321 720 FunFam Wall-associated receptor kinase 2 471 681 - -
Dere02g0321 720 Gene3D Transferase(Phosphotransferase) domain 1 471 679 - -
Dere02g0321 720 Coils Coil 658 678 - -
Dere02g0321 720 Gene3D LysM domain 220 288 IPR036779 -
Dere02g0321 720 Gene3D Phosphorylase Kinase; domain 1 364 470 - -
Dere02g0321 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Dere02g0321 720 CDD LysM 235 272 IPR018392 -
Dere02g0321 720 SMART LysM_2 114 154 IPR018392 -
Dere02g0321 720 SMART LysM_2 235 279 IPR018392 -
Dere02g0321 720 ProSiteProfiles LysM domain profile. 234 278 IPR018392 -
Dere02g0321 720 FunFam Wall-associated receptor kinase 2 365 470 - -
Dere02g0321 720 SMART serkin_6 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0321 720 ProSitePatterns Protein kinases ATP-binding region signature. 401 424 IPR017441 GO:0005524
Dere02g0321 720 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 112 672 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0321 Dere-ChrDere02 3208932 3211237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0321 285 672 Receptor kinase-like Gene Family AT1G16130 54.220 5.65e-138 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dere02g0321 Pkinase 3e-49 CL0016