Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0319 ATGAATTGCTTCCCTTGTTTCTCCTCTAACAAAAGTAAGAAAAGCCAAAGCAAGAGGGAGCATGGTTCCGCACCCCAGGACAACATTGCAGCTACAACACCCGACATGAAGAAACCAAAGCAAGATAACACAGCCCAAATTGATCCGGCAAGTATTAATGCACAAACTTTCACTTTCCGTGAGCTAGCAATTGCAACTAAGAATTTCCGCAAGGAATGCCTACTGGGTGAAGGTAACTTTGGCAGAGTCTACAAGGGCACACTCCCTGCAACCGGGCAGGTGGTGGCTGTGAAGCAACTTGACAGAAATGGGGTGCAAGACAATAAGGACTTTCTGGTTGAGGTTTTGAGGCTAAGCCTCTTGCACCATGACAATCTGGTCAAGCTTATTGGTTATTGTGCCGATGGGGATCAACGTCTTTTGGTGTATGAATTCGTCGGAGGAGGTTCGCTAGAAGACCATCTTTTTGGGAACGCACCAAATAAGCGTCCATTAGATTGGTTCACTAGAATGAAAATAGCATCTAATGCTGCAAAAGGATTGGAGTACTTGCATGACACGGCCAATCCCCCAGTGATATACCGGGACTTGAGTTCCCCAGATATCTTGCTAGATGATGATTTTAATCCTAGACTCTCTGATTATGGTTTAATCAAGCTTGCCGGGGGAGATAAGGCTAAATCTGCACCTTCAATAGTTATGGGTACCTATGGATACTCTGCTCCAGAGTATGTAACAACAGGTCAGCTCACATTGAAATCAGATGTCTACAGTTTTGGAGTTATCTTGCTGGAGGTCATTACTGGACGAAGAGCCATTGACACCACAAGACCAAACAATGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAAAGACCCAAAAAGATTTCCGGAAATGGCAGATCCAGTTCTGAAGAGAGAATTCCCAGAAAAGGACCTAAATCAAGCAGTAGCAATAGCAGCCATGTGCCTGCAGGAAGAAGCGGGAGCCCGTCCTTTGATGACTGACGTTGTAACTGCACTTAGTTTCCTTTCCATGGTTCCTCCCGCATCTGTTCCACAAGCCACCTCACCCGCTGGGGAGGTTACTACCAGTGAAAGTGAAAGTGAAACTAGTAATAAGAGCCGCAGGGTAGATAGTTCCGATGAGGAGGATGAATGA 1167 0.4559 MNCFPCFSSNKSKKSQSKREHGSAPQDNIAATTPDMKKPKQDNTAQIDPASINAQTFTFRELAIATKNFRKECLLGEGNFGRVYKGTLPATGQVVAVKQLDRNGVQDNKDFLVEVLRLSLLHHDNLVKLIGYCADGDQRLLVYEFVGGGSLEDHLFGNAPNKRPLDWFTRMKIASNAAKGLEYLHDTANPPVIYRDLSSPDILLDDDFNPRLSDYGLIKLAGGDKAKSAPSIVMGTYGYSAPEYVTTGQLTLKSDVYSFGVILLEVITGRRAIDTTRPNNEQNLVSWAQPLFKDPKRFPEMADPVLKREFPEKDLNQAVAIAAMCLQEEAGARPLMTDVVTALSFLSMVPPASVPQATSPAGEVTTSESESETSNKSRRVDSSDEEDE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0319 388 FunFam probable serine/threonine-protein kinase RLCKVII 41 145 - -
Dere02g0319 388 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Dere02g0319 388 MobiDBLite consensus disorder prediction 1 43 - -
Dere02g0319 388 Pfam Protein kinase domain 71 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0319 388 Gene3D Phosphorylase Kinase; domain 1 38 145 - -
Dere02g0319 388 Gene3D Transferase(Phosphotransferase) domain 1 147 350 - -
Dere02g0319 388 MobiDBLite consensus disorder prediction 372 388 - -
Dere02g0319 388 SUPERFAMILY Protein kinase-like (PK-like) 55 369 IPR011009 -
Dere02g0319 388 MobiDBLite consensus disorder prediction 351 388 - -
Dere02g0319 388 CDD STKc_IRAK 75 343 - -
Dere02g0319 388 FunFam Serine/threonine-protein kinase PBS1 146 359 - -
Dere02g0319 388 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0319 388 MobiDBLite consensus disorder prediction 351 371 - -
Dere02g0319 388 PANTHER OS07G0668900 PROTEIN 3 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0319 Dere-ChrDere02 3181911 3183784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0319 1 354 Glycoside Hydrolase AT3G07070 63.187 6.52e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere02g0319 Pkinase 9e-41 CL0016