Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0305 ATGGCTTCTCTGTCTTGCTCCACCTCTGACCTCGCCGAACTTCTCACCGCCACCACCAACGCAACCGGTGCTGCGGAATACCTCTGCACACAATTTGAAGCCATGTCGGCAAAACTGAGTGACACCAGCTACGCCGTGAATAACACCTACCTTTTGTTCTCAGCGTATCTCGTGTTCGCCATGCAGCTTGGTTTCGCCATGCTGTGCGCCGGTTCCGTGCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCTGCTGCCGGTGCCCTCTCCTACTACCTCTTTGGTTTCGCCTTTGCCTTCGGGTCCCCCTCCAACGGCTTCATCGGTCGGCACTTCTTCGGCCTCCGCCACTTCCCCTCTCCTTCCGGAGACTATAGCTTCTTCCTATACCAATGGGCTTTCGCCATAGCTGCCGCCGGAATCACCAGTGGCTCCATCGCCGAGAGAACCCAGTTCGTGGCTTACCTCATCTACTCCTCTTTTCTCACCGGCTTCGTTTACCCCGTCGTTTCCCATTGGTTCTGGTCCACCGACGGATGGGCCAGTCCCACTCGGGCCGATAGCAACCTATTGTTTGGGACCGGCGCCATTGACTTTGCCGGTTCGGGAGTGGTTCACATGGTGGGCGGCATAGCAGGGTTGTGGGGTGCCTATTTGGAAGGCCCAAGAATTGGGCGGTTCGACAGGACGGGCCGGTCCGTGGCCTTACGGGGGCACAGCGCGTCGCTGGTTGTGCTGGGTTCGTTCTTATTATGGTTCGGGTGGTACGGGTTCAACCCCGGCTCGTTCCTGACGATCTTGAAAGCATACGGTGGGAATGGCAGTTACTATGGTCAATGGAGTGCGATAGGAAGGACAGCCGTGACGACAACATTGGCGGGGTGCACGGCGGCTCTGACCACCTTGTTCAGCAAACGCTTATTGGTAGGACATTGGAACGTGATAGACGTGTGTAATGGTTTGCTTGGGGGATTCGCTGCTATAACGTCAGGGTGCTCCGTGGTAGAGCCATGGGCGGCAATCATATGCGGCTTCGTGGGGGCATGGGTTCTCATCGGCCTCAACATGCTGGCGGTGAGGGAGAAGTACGACGATCCGCTGGAGGCGGCGCAACTTCACGGAGGGTGCGGCGCGTGGGGGTTGGTGTTCACGGGATTGTTCGCGAAGGAGAAGTACGTGAATGAAGTGTACGGAGGAAAAGGGAGGGCGTACGGGCTGCTGATGGGAGGCGGGGGAAGACTGCTGGGGGCGCAGGTGGTGGAGATAGCGGTAGTGTGCGGGTGGGTGACGGCGACTATGGGGCCATTGTTCTACGGGCTTAATAAGATGAAGCTGCTGAGAATATCGAGGGAGGATGAGATGGCGGGGATGGATCTGACGAGGCATGGAGGCTTCGCTTATGCATACCGTGATGAAGAAGACGAGAGCGTGAAGCCTGGTGGTGGGTTCATGATGGGGAAGATAGAGCCTACCAGTTCCCCTTCAACTCCCACACCCTAA 1515 0.5756 MASLSCSTSDLAELLTATTNATGAAEYLCTQFEAMSAKLSDTSYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALSYYLFGFAFAFGSPSNGFIGRHFFGLRHFPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSTDGWASPTRADSNLLFGTGAIDFAGSGVVHMVGGIAGLWGAYLEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKAYGGNGSYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIICGFVGAWVLIGLNMLAVREKYDDPLEAAQLHGGCGAWGLVFTGLFAKEKYVNEVYGGKGRAYGLLMGGGGRLLGAQVVEIAVVCGWVTATMGPLFYGLNKMKLLRISREDEMAGMDLTRHGGFAYAYRDEEDESVKPGGGFMMGKIEPTSSPSTPTP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0305 504 Gene3D Ammonium transporter AmtB like domains 25 485 IPR029020 -
Dere02g0305 504 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere02g0305 504 PANTHER AMMONIUM TRANSPORTER 21 468 - -
Dere02g0305 504 SUPERFAMILY Ammonium transporter 45 453 - -
Dere02g0305 504 MobiDBLite consensus disorder prediction 482 504 - -
Dere02g0305 504 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dere02g0305 504 FunFam Ammonium transporter 28 486 - -
Dere02g0305 504 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0305 Dere-ChrDere02 3037612 3039126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0305 27 504 Inorganic Solute Cotransporters AT1G64780 81.913 0.0 807