Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0297 ATGGAAGCCAATGAAAATCAACTCAGCTCCTACTACCATCAACAGCCGCAGCAGAGCACCACCGTCACCACCACTTCCTCACCAACTAATGGCCTCTTTCCAACCGATGGGTCCCACTTGATGTACCCTCATTCCGTGCCCTCCGCCGTCTCCTCCCAACTTGAACCCGCAAAGAGGAAGAGAGGGAGACCCAGGAAGTACGGCACCCCAGAGCAAGCTCTAGCAGCTAAGAAAGCTGCTGCCTCCTCTTCTCACTCCTTCTCTCATAGGGACAAAAAAGGTCATGGCTTGCCTACTGCCTCTGCTTCCGGCTCCTCCAAGAAATCTCAGTCTTTTGCTCTAGGCAATGCAGGACAAGGCTTCACCCCACATGTTATTACTGTTGCTGCCGGTGAGGATGTTGGCCAGAAAATTATGTTATTCATGCAACAAAGTGGACGGGAAATGTGCATTTTGTCTGCATCTGGTTCTATCTCTGATGCATCTCTTCTTCAGCCAGCAATTTCAGGAGGCAATGTTACATATGAGGGTCGGTTTGAGATTATTTCACTTTCTGGTTCCTATGTCCGTACTAAACTTGGAGGGCGGACTGGTGGTCTCAGTGTATGCTTATCTAATACCGATGGCCAAATCGTAGGTGGAGGAGTTGGTGGACCCCTCATGGCTGCTGGTCCAGTTCAGGTCATCGTTGGTACATTTATTATTGACTCCAAGAAGGATGCTGATGCTGAAGCTGGTGTAAAAGGTGATGCTTCTGCCAACATGTTGCTTTCACAAATTGGCCAACATGTTGCCGGTGAATCATATTTAGGTTTCCGCCCTGCAGTTGACTCTGCCAGAGGGAACCCGGTCCAGGGAAACGATGAGCATCAAGCTATGGGAGGAAGCCATTTCATGATTCAACAGTGTGGTCTGCATGTGACTCCTTCCAGGCCCACAGACTGGGGGGCTCTGGATTCGAGAAATGCTGGCTATGATCTGACAGGAAGAACAGGGCATGGTGCGCACCAAAGTCCTGAGAATGGGGAGTATGACCGGGTCCCTGATTGA 1050 0.5029 MEANENQLSSYYHQQPQQSTTVTTTSSPTNGLFPTDGSHLMYPHSVPSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAAASSSHSFSHRDKKGHGLPTASASGSSKKSQSFALGNAGQGFTPHVITVAAGEDVGQKIMLFMQQSGREMCILSASGSISDASLLQPAISGGNVTYEGRFEIISLSGSYVRTKLGGRTGGLSVCLSNTDGQIVGGGVGGPLMAAGPVQVIVGTFIIDSKKDADAEAGVKGDASANMLLSQIGQHVAGESYLGFRPAVDSARGNPVQGNDEHQAMGGSHFMIQQCGLHVTPSRPTDWGALDSRNAGYDLTGRTGHGAHQSPENGEYDRVPD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0297 349 MobiDBLite consensus disorder prediction 1 111 - -
Dere02g0297 349 Pfam Plants and Prokaryotes Conserved (PCC) domain 123 233 IPR005175 -
Dere02g0297 349 CDD DUF296 122 233 IPR005175 -
Dere02g0297 349 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 254 IPR039605 GO:0003680
Dere02g0297 349 SUPERFAMILY AF0104/ALDC/Ptd012-like 119 234 - -
Dere02g0297 349 MobiDBLite consensus disorder prediction 1 34 - -
Dere02g0297 349 MobiDBLite consensus disorder prediction 311 349 - -
Dere02g0297 349 ProSiteProfiles PPC domain profile profile. 117 253 IPR005175 -
Dere02g0297 349 Gene3D - 123 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0297 Dere-ChrDere02 2970317 2976964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0297 20 349 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.613 6.27e-93 281