Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0296 ATGGAAAAAGCATTGGTCTCTCTGTTGTTGGCTTCTTGTATCGCGGTCTCTGCTTCTGCCATCGATGGTGAATTTGCACAGTGCAATTGCGACGAAGAAGGGCTTTGGAGTATACATACCATTCTAGAGAGCCAAAGAGTCAGTGACTTTTTCATTGCTATAGCATATTTTTCAATCCCCGTTGAACTGCTTTACTTCGTTAGTCGCTCCAACCTTCCCTTCAAATGGGTGTTCCTTCAATTCATTGCATTCATAGTCCTCTGTGGCTTGACGCATTTACTTAATGCTTATACTTATTACGGACCTCACTCCTTCCAGTTGGTGCTCTCCCTTACAATTGCCAAACTCCTTACAGCTCTTGTCTCTTGTGCAACTGCAATTACCCTTTTCACTTTGATTCCTCTTCTTCTTAAAATTAAAGTGAGGGAGCTCTTTTTGAAGCAGAACGTGCTGGAATTAGACCAAGAGATTGGAATGATCAAAAGACAAAAGGAAGCAAGTTGGCATGTTCGGATGCTAACACGGGAAATTAGGAAGTCTCTGGATAAGCATACAATCTTGTACACCACCCTTGTTGAGCTTTCTAAGTCGTTGGACTTGCATAACTGTGCTGTTTGGATGCCAAATGAGGATGGACGGGAAATGTACTTAACCCATGAGTTGAAAACAAGCTCTGCCAAGATTTTTCACAATTCTATTCCCATAAACGACCTAGATGTTTTAGAGATAAGAAAAAGTAAGGGGGTGCGGATTTTGAGATCTGAATCAGCTCTAGGAGCTGCAAGTAAAGGGGGATCTAGGGAGTCAGGTGCTGTTGCTGCTATTCGTATGCCAATGCTTCATGTTTCAAATTTTAAAGGAGGGACACCGGAGTTGGTTGAGACATCCTATGCTATTCTGGTTTTGGTTCTTCCAAATTCAAACTCTAGGACTTGGAGCCACCATGAGATGGAGATAGTGGAAGTAGTTGCTGACCAGGTGGCTGTGGCCCTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGAAACTGGCAGAGCAGAACCGAGCATTGCAACAGGCTAAAAAGAATGCAATGATGGCCAGCCAGGCAAGGAAATCATTTCAGAAAGTGATGAGTCATGGAATGCGCAGGCCTATGCATTCAATCTTGGGCTTGCTTTCGATGTTTCAAGAGGACAATTTGAGATCTGAGCAAAAGATTGTAGTTGACACAATGATGAAAGTTAGCCATGTTCTCTCAAGTTTGATTAATGATGTAATGGAGATTTCAGTAAATGATAAAGGAAGCTTCCGGCTAGAGATGAAACCTTTCCATTTACATTTAATGATGAGGGAAGCTGCCTGTATTGCCAAGTGTTTATGTGTATATAAAGGCTTTGGTTTTAAAATTGAAGTCCCGAAGTCTTTGCCTGATATGGTGATGGGCGATGAGGCAAGGGCTTTTCAAGTAATTTTGCATATGATTGACTTTCTCTTGAACATATATGATGGAGAAAGGACTCTCATTTTTCGAGTTTTTCTTGAAAATGATAATGGGGACAAGGATGATAAATTTTTGGGAATATGGAGATCAAGCATGCAAAATGATTATGTATATATAAGATTTGATTTTCAGATAACTGGTACAAGTTCCCAGTCATTTGAATCAACTTCAACAAGAAACTTTGCTGGTAGAAGGCACTACAACAATGAACCTAATGAGGGCCTAAGCTTCAGCATGTGCAAAACGCTGGCACAGATTATGCAAGGCAATATCTGGATATCACCAAACTCTCTGGGTTTGGCACAATGCATGACACTTGTTCTCAAGTTTCAGATAGGGCCATCACTCGGAAGATCTATTTTTGCACCTAAAGATTCTTTGGACACATCGTTTAGAAGCCTCAAGGTTGTGTTAACTGATGATGATGATATAAACAGGACAGTGACCAAGAAGCTTCTTGAGAAGCTGGGTTGTCAAGTAACTGCTGTTTCATCAGGGTTTGAATGCCTGGGTGCTATAAGTGCATCTGGTAACACATTCAAAATCATCCTCCTGGATCTGCACATGCCCGAAATGGATGGTTTTGAAGTGGCGATGAGGATTCGGAAGTTCCACAGCCGCAACTGGCCCTTGATTATTGCTCTTACTGCAAGTGCAGAAGAACATGTGATGGATAGATGCCTACAGGTGGGAATGAATGGATTGATTCGAAAACCGATTCTCCTTCATGACATAGCAGATGAACTTGGGAGAGTCCTGCAACGTGCAGCCTTTTCCCCCGACGAATTGATTATGGATTCTAAGTGGTGTATAACTGATCGCTTGCCTGTGTCTGACAGTGAAGGATGGATCGACACTGTTCAGAAATTGCGCATGATATTATAG 2379 0.4195 MEKALVSLLLASCIAVSASAIDGEFAQCNCDEEGLWSIHTILESQRVSDFFIAIAYFSIPVELLYFVSRSNLPFKWVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLVLSLTIAKLLTALVSCATAITLFTLIPLLLKIKVRELFLKQNVLELDQEIGMIKRQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKSLDLHNCAVWMPNEDGREMYLTHELKTSSAKIFHNSIPINDLDVLEIRKSKGVRILRSESALGAASKGGSRESGAVAAIRMPMLHVSNFKGGTPELVETSYAILVLVLPNSNSRTWSHHEMEIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAKKNAMMASQARKSFQKVMSHGMRRPMHSILGLLSMFQEDNLRSEQKIVVDTMMKVSHVLSSLINDVMEISVNDKGSFRLEMKPFHLHLMMREAACIAKCLCVYKGFGFKIEVPKSLPDMVMGDEARAFQVILHMIDFLLNIYDGERTLIFRVFLENDNGDKDDKFLGIWRSSMQNDYVYIRFDFQITGTSSQSFESTSTRNFAGRRHYNNEPNEGLSFSMCKTLAQIMQGNIWISPNSLGLAQCMTLVLKFQIGPSLGRSIFAPKDSLDTSFRSLKVVLTDDDDINRTVTKKLLEKLGCQVTAVSSGFECLGAISASGNTFKIILLDLHMPEMDGFEVAMRIRKFHSRNWPLIIALTASAEEHVMDRCLQVGMNGLIRKPILLHDIADELGRVLQRAAFSPDELIMDSKWCITDRLPVSDSEGWIDTVQKLRMIL 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0296 792 Gene3D - 166 331 IPR029016 -
Dere02g0296 792 FunFam Ethylene receptor 630 754 - -
Dere02g0296 792 Gene3D - 332 430 - -
Dere02g0296 792 FunFam Ethylene receptor 4 334 428 - -
Dere02g0296 792 CDD HATPase_ETR2_ERS2-EIN4-like 473 606 - -
Dere02g0296 792 ProSiteProfiles Response regulatory domain profile. 633 751 IPR001789 GO:0000160
Dere02g0296 792 SMART gaf_1 182 341 IPR003018 GO:0005515
Dere02g0296 792 SUPERFAMILY GAF domain-like 185 334 - -
Dere02g0296 792 Gene3D - 431 611 IPR036890 -
Dere02g0296 792 SMART REC_2 632 747 IPR001789 GO:0000160
Dere02g0296 792 SUPERFAMILY CheY-like 629 753 IPR011006 -
Dere02g0296 792 Pfam GAF domain 184 331 IPR003018 GO:0005515
Dere02g0296 792 Pfam Response regulator receiver domain 634 744 IPR001789 GO:0000160
Dere02g0296 792 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 754 - -
Dere02g0296 792 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 352 432 IPR036097 GO:0000155|GO:0007165
Dere02g0296 792 ProSiteProfiles Histidine kinase domain profile. 374 610 IPR005467 -
Dere02g0296 792 CDD HisKA 365 427 IPR003661 GO:0000155|GO:0007165
Dere02g0296 792 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 436 597 IPR036890 -
Dere02g0296 792 Pfam His Kinase A (phospho-acceptor) domain 369 428 IPR003661 GO:0000155|GO:0007165
Dere02g0296 792 Gene3D - 632 767 - -
Dere02g0296 792 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Dere02g0296 792 Coils Coil 337 367 - -
Dere02g0296 792 CDD REC_ETR-like 632 747 - -
Dere02g0296 792 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0296 Dere-ChrDere02 2963625 2967557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0296 22 755 Miscellaneous Gene Families AT3G04580 62.735 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere02g0296 GAF 1.6e-11 CL0161