Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0281 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAGGATGAAATCCTAAAAGCGGCTGTCATGAAGTATGGTAAAAACCAGTGGGCTCGAATCTCTTCGCTCCTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGCTGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAGTGGACAAGGGAAGAGGATGAAAAACTTCTTCATCTCGCTAAGCTCATGCCCACCCAGTGGAGAACAATTGCTCCAATTGTTGGCCGTACTCCTTCTCAGTGCCTTGAGCGGTATGAGAAACTCCTTGATACAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCCCGAAAATTGCGTCCTGGGGAGATTGACCCAAACCCTGAGTCAAAACCTGCACGGCCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCTGAAGCACGAGCTAGGTTGGCCAACACTAAGGGTAAGAAGGCAAAACGGAAGGCCAGGGAGAAACAGCTAGAGGAAGCGAGGAGGCTTGCTTCTTTACAAAAAAAGAGAGAACTGAAGGCTGCTGGAATTGATGTCAGGCAGCGGAGGAGGAAAAGGAAAGGAATAGACTATAATGCAGAAATCCCTTTTGAGAAAAGGCCTCCTTCAGGGTTTTTTGATGTTACAGACGAAGACAGGCCAGTGGAACAGCCCAAGTTCCCAACCACAATTGAGGAACTTGAGGGGAAGAGAAGGGTCGATGTGGAAGCACAGTTAAGAAAGCAAGACATTGCAAAGAATAAAATTGCACAGAGGCAAGATGCCCCGTCAGCTATACTGCACGCCAACAAGCTCAATGATCCAGAAACAGTTAGAAAGAGGTCAAAACTAATGCTTCCACCACCCCAGATTTCTGATCACGAATTGGAAGAAATTGCAAAGATGGGTTATGCCAGTGACCTTGCAGGTGAGGAACTTGCAGAAGGTAGCGGTGCAACACATGCTCTTCTGGCTAATTATGCACAGACTCCTAGCCAGGGAATGACTCCTTTACGAACTCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGAGAATCTCAGACACCATTGTTGGGAGGAGATAACCCAGATTTGCATCCTTCAGATTTTTCTGGCGTCACTCCTAAAAGAAAAGAAATTCAGACTCCAAATCCTATGCTGACTCCTTCTGCAACCCCTGGAGGTGCAGGCCTCACTCCTAGAAGTGGTATGACACCAGCAAGGGATGGTTTTTCTTTTGGCATGACTCCTAAGGGAACTCCTCTAAGAGATGAGCTTCGTATCAATGAGGACATGGATATGCACAGTGCAAAACTTGAGCTACATAGACAAGCTGATCTCAAAAGAAGCTTGCGCTCTGGTTTAAGTAGTCTTCCGCAGCCCAAAAATGATTACCAGATAGTTATGCAACCCGTTCCAGAAGATGTTGAAGAACATGAGGAGAAGATTGAGGAGGATATGTCTGACAGAATAGCTAGGGAAAAGGCTGAGGAAGAAGCTCGGCAACAGGTATTACTTAGAAAAAGGTCAAAGGTCCTTCAAAGGGAGCTTCCTAGGCCTCCTGCTGCATCGCTGGAACTGATAAGAAATTCTTTGATTATTGCTGATGGGGACAAGAGTTCCTTTGTTCCTCCTACTTCTATCGAGCAAGCTGATGAGATAATAAGAAAGGAGCTTTTAAGCTTACTGGAACATGATAATGCCAAGTACCCACTTGATGAGAAAGTGAATAAGGAGAGAAAAAAAGGAGTCAGTCGTGCAGCAAATGGGTCTGTTGTTGTCCCTCTGATTGAAGATTTTGAGGAAGATGACTTGAAAGATGCTGATCAGTTGATAAAGGAAGAGGCTCAATATCTTCATCTAGCAATGGGACATGAAAGTGAACCCCTTGATGAATTTGTTGAAGCGCATAGAACTTGTCTCAATGATCTTATGTACTTCCCCACCCGTAATGCCTATGGGCTTTCAAGCGTTGCGGGAAACCTGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAGAGTGTGAGAAATAAGTTGGATGATGGCAAGGAGAAGGTAGTACGTCTTGAGAAGAAGGTGATAGTTCTCACACAAGGCTATGAGATGAGGGCAAAGAAAAGTCTTTGGCCACAAATCGATGCCACCTTCAAGCAGATGGACACTGCTGCAACAGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCAGCTAGCAGCTTCACACCGGATAAACAATATATGGGCTGAAGTAGAGAAGCAAAAGGAACTTGAGAAAGATTTACAAAAGAGGTATGGGGATCTTCTGGCAGAGCTGGAAAGGATTCAAAATGTCATGAACCAATACAGGGTACAAGCTCAACAGCAAGAAGAAATTGCTGCTAAGAATCGTGCTGTTGAATTAGCTGAGACTGCATCTGATGAAACTAACGTGCAAGGTATAGAGAATCATAAAGATGCATCTGACTCAGATGAGCATGGAAGTGCTATGTTAGTTAATTCAACCCATGATGAAACTGCTGACCAGCAAGTAGACGTGGTGCAAGACAAGGTCACTTCCAGCCCACAAAATGGTACCGATGTGGATGCTGATAAGGAGCAAATGACACATGACACTGATGTTGAAATACACAATGCTACGCCCGGTGGACAAGGGGACAGTGCAACAGCAGGTAACAGCACTGACAGTTATATTGCCCAGAGGGAGATCACTCAAGACTCGGGTGCTGCAGAGGATACAAGAAGTATTGAGGGATATGGGGAAGATCAACATGCTAAGAATCCAGATGATGTGGTGGAAGCCATAAACTCACATGATAACAAAACACAGGAAACCACTGCTCTAGGTTAG 2919 0.4515 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRQRRRKRKGIDYNAEIPFEKRPPSGFFDVTDEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGYASDLAGEELAEGSGATHALLANYAQTPSQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGDNPDLHPSDFSGVTPKRKEIQTPNPMLTPSATPGGAGLTPRSGMTPARDGFSFGMTPKGTPLRDELRINEDMDMHSAKLELHRQADLKRSLRSGLSSLPQPKNDYQIVMQPVPEDVEEHEEKIEEDMSDRIAREKAEEEARQQVLLRKRSKVLQRELPRPPAASLELIRNSLIIADGDKSSFVPPTSIEQADEIIRKELLSLLEHDNAKYPLDEKVNKERKKGVSRAANGSVVVPLIEDFEEDDLKDADQLIKEEAQYLHLAMGHESEPLDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGNLEKLAALQNEFESVRNKLDDGKEKVVRLEKKVIVLTQGYEMRAKKSLWPQIDATFKQMDTAATELECFQVLQKQEQLAASHRINNIWAEVEKQKELEKDLQKRYGDLLAELERIQNVMNQYRVQAQQQEEIAAKNRAVELAETASDETNVQGIENHKDASDSDEHGSAMLVNSTHDETADQQVDVVQDKVTSSPQNGTDVDADKEQMTHDTDVEIHNATPGGQGDSATAGNSTDSYIAQREITQDSGAAEDTRSIEGYGEDQHAKNPDDVVEAINSHDNKTQETTALG 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0281 972 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 802 IPR047242 GO:0000398|GO:0000974
Dere02g0281 972 FunFam CDC5 cell division cycle 5-like 5 59 - -
Dere02g0281 972 SMART sant 58 105 IPR001005 -
Dere02g0281 972 SMART sant 6 55 IPR001005 -
Dere02g0281 972 Gene3D - 60 114 - -
Dere02g0281 972 MobiDBLite consensus disorder prediction 938 952 - -
Dere02g0281 972 CDD SANT_CDC5_II 55 106 IPR047240 -
Dere02g0281 972 MobiDBLite consensus disorder prediction 926 952 - -
Dere02g0281 972 FunFam CDC5 cell division cycle 5-like 60 120 - -
Dere02g0281 972 MobiDBLite consensus disorder prediction 827 851 - -
Dere02g0281 972 Coils Coil 774 815 - -
Dere02g0281 972 Gene3D - 5 59 - -
Dere02g0281 972 Coils Coil 167 187 - -
Dere02g0281 972 Coils Coil 688 715 - -
Dere02g0281 972 MobiDBLite consensus disorder prediction 378 422 - -
Dere02g0281 972 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Dere02g0281 972 MobiDBLite consensus disorder prediction 110 148 - -
Dere02g0281 972 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Dere02g0281 972 CDD SANT 10 53 IPR001005 -
Dere02g0281 972 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Dere02g0281 972 Pfam pre-mRNA splicing factor component 405 653 IPR021786 -
Dere02g0281 972 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Dere02g0281 972 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Dere02g0281 972 Pfam Myb-like DNA-binding domain 10 70 - -
Dere02g0281 972 MobiDBLite consensus disorder prediction 398 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0281 Dere-ChrDere02 2803490 2809549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0281 1 831 MYB-Related Transcription Factor Family AT1G09770 75.090 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere02g0281 Myb_Cef 3.3e-59 No_clan