Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0274 ATGGCTCCCAATCCAGATCCCGATCCAAGATTCACCAAGGCCTTCAGTGCTATGGAGGCCTTAGGAATTTCTCGTGATGAGGTGAATCCAGTGTTGCAAAATCTTTTAAAAGTGTATGATTGGAACTGGGAATATATTGAAGAAGATAACTATCGGACGCTGATAGATGCATACTTTGAGCCTAAGGAAGATAAGGAAGCAGGAGGTAAGAGAAAAGCCCTAATCAGCCATCACGGTGGAAGAAGACAAACTCAGAAATTTCATTTGGTAGATGAAGATGATCAGCTTTCATTGACCATGGACAACTCAAGACGAATGTTGTCTATAGAAAAGAATGAAACACCTCTAAATACTTTTGGACAGGAAACCATTGAATCGTCTCAACCTTTAATGAGCAACAAGAGGCCCAGAATTAGTCCTCAATCGTTGAAAACAAGGTTTGGTGAGGCAGAAAGAATATCAAAGTTACCTGGCATTGCCGCTACAGATAGAAAATCAAATCATGAGAAAGCCTCATCTGCAAGGCATGGGGGAGAGCCTGTTGATAAGCCTAGCCATGCTCATATCCAAAGTGAAGATATACCAAGTAATCACTGTAAGAAAGAGATAATGAAGCAAAAAACTGAGCAATATGATTCACATCTTGGACTCACTTCAGCTAGTTGTAGAGGAGGCCCATCTGAAGTTGCATCTAGAAAGCATTCTGTCAAGTTGCTGTCTTCTCCGAATTTGGATATGAAAAATTTTAGCGACAATTCTGTACATAATAACCACTCCACAAGGCCTATGGCTAATATTGATATTGCCTCTTCACCTTTGGGGGAAGTGAAAATTTCTCTAAACTGTGCCTCCGCCCTTGGACAACCAAACTTCAATATTCCTAATTTAGAAGCTGTTATGAAGTTCATGGAGGAGAAGTACCTTAAAGGACACCAATTTTCTATGGTGAATTTATTAACTGGTTTGTGCAAGAGTTTCCTTCAATTGGGCACGAATATGAAGCATAAGGGTTCACATCCTGAACATAAGAATACAAACAACTTAACATTTGCGCCACAACAAGCTGTTGCTCAAGGTAAGAAGAAGCCATTTCATTTTCTCAGTGACATAGCAAAAGGTTCAGAAAAGGTGAAAATATCATTGGTAGATGAGTTTGGTAACGGGGAATTGCCAAAGTTTAATTACATACCATATAATCTAATATATCAAAGTGCTATTGTGAATATTTCACTGGCTCGTATTGCGGATGAGGGTTGCTGCACAGATTGTTCAGGAAACTGTCTATTTGCGTCACTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACTCTGCAAGGTTTGTTGAAAGAAGAATTTCTCAAAGCATGCATGTCTATGAAAAGGGAACCTGAGAATCATCAGGTTGTGTACTGTCAAGATTGTCCACTAGAAAGGTCTAAGAATGAATACATGCCTGAGCTATGCAAGGGGCATCTGATTAGGAAGTTCATTAAGGAATGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGTATAGTGCAAAAAGGTTTAAGGTGCAAACTGCAGGTGTTCCATACTCATGATGGAAAGGGCTGGGGCCTTAGAACACTAGAAGATTTGCCAAGGGGATCCTTTGTATGTGAATATGTTGGAGAAATATTAACCAACATGGAGTTATATGAAAGGATTGTGCACAAAAATGGCAATGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGAATGTTAAAGGATGAGGAGGCACTATGTTTAGATGCAACATATAATGGAAATGTTGCAAGGTTTATTAATCATAGATGCTCAGATGCAAATTTGATAGACGTACCTGTTGAAGTAGAGACTCCAGATCGCCATTACTATCATCTTGCCTTCTTTACTAACAGGAACGTGAGTGCTCGCGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGATCATGACCACCCTATTAAAGCATTCCGATGTTGTTGTGGAAGCTCATTCTGCCGTGATAAGAAACGGAAAGGGAAAAGAAAAATAGAGAAACTAGTTAATGAGGCAAGAGAAAAGTCTAACGTGGCGATCCCTACTACAACGAGTGGACCTGGAGCCAAACAACGTTCTTCAGGTATAGACTAG 2175 0.4037 MAPNPDPDPRFTKAFSAMEALGISRDEVNPVLQNLLKVYDWNWEYIEEDNYRTLIDAYFEPKEDKEAGGKRKALISHHGGRRQTQKFHLVDEDDQLSLTMDNSRRMLSIEKNETPLNTFGQETIESSQPLMSNKRPRISPQSLKTRFGEAERISKLPGIAATDRKSNHEKASSARHGGEPVDKPSHAHIQSEDIPSNHCKKEIMKQKTEQYDSHLGLTSASCRGGPSEVASRKHSVKLLSSPNLDMKNFSDNSVHNNHSTRPMANIDIASSPLGEVKISLNCASALGQPNFNIPNLEAVMKFMEEKYLKGHQFSMVNLLTGLCKSFLQLGTNMKHKGSHPEHKNTNNLTFAPQQAVAQGKKKPFHFLSDIAKGSEKVKISLVDEFGNGELPKFNYIPYNLIYQSAIVNISLARIADEGCCTDCSGNCLFASLPCACAQETGGEFAYTLQGLLKEEFLKACMSMKREPENHQVVYCQDCPLERSKNEYMPELCKGHLIRKFIKECWRKCGCDMQCGNRIVQKGLRCKLQVFHTHDGKGWGLRTLEDLPRGSFVCEYVGEILTNMELYERIVHKNGNDRHTYPVTLDADWGSEGMLKDEEALCLDATYNGNVARFINHRCSDANLIDVPVEVETPDRHYYHLAFFTNRNVSAREELTWDYGIDFDDHDHPIKAFRCCCGSSFCRDKKRKGKRKIEKLVNEAREKSNVAIPTTTSGPGAKQRSSGID 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0274 724 MobiDBLite consensus disorder prediction 702 724 - -
Dere02g0274 724 SMART set_7 525 665 IPR001214 GO:0005515
Dere02g0274 724 MobiDBLite consensus disorder prediction 123 140 - -
Dere02g0274 724 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 691 - -
Dere02g0274 724 FunFam SET-domain containing protein lysine methyltransferase family protein 370 684 - -
Dere02g0274 724 ProSiteProfiles Pre-SET domain profile. 419 522 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g0274 724 MobiDBLite consensus disorder prediction 156 196 - -
Dere02g0274 724 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 720 IPR025776 -
Dere02g0274 724 MobiDBLite consensus disorder prediction 162 196 - -
Dere02g0274 724 Pfam Ubiquitin-binding WIYLD domain 9 63 IPR018848 -
Dere02g0274 724 SUPERFAMILY SET domain 377 682 IPR046341 -
Dere02g0274 724 SMART preset_2 367 509 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g0274 724 MobiDBLite consensus disorder prediction 703 724 - -
Dere02g0274 724 Pfam Pre-SET motif 370 517 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g0274 724 CDD SET_SETDB-like 391 659 - -
Dere02g0274 724 Pfam SET domain 537 659 IPR001214 GO:0005515
Dere02g0274 724 Gene3D SET domain 370 684 IPR046341 -
Dere02g0274 724 Gene3D - 3 64 IPR043017 -
Dere02g0274 724 MobiDBLite consensus disorder prediction 123 144 - -
Dere02g0274 724 ProSiteProfiles SET domain profile. 525 659 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0274 Dere-ChrDere02 2726328 2731163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0274 501 682 C2H2 Transcription Factor Family AT2G23740 40.107 1.86e-32 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere02g0274 Pre-SET 8.2e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0274 02 2726328 2731163 Dere02g0274 02 2726328 2731163 CCT
Dere02g0274 02 2726328 2731163 Dere01g3054 01 45080904 45087256 CCT
Dere02g0274 02 2726328 2731163 Dere02g0274 02 2726328 2731163 ECH