Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0260 ATGAATGAGACTATACGTCTCCTTGTCTTGCTTTCTGTTCTGTGTCTCTCTGTTCTCTTCAATGCCCTTCATGTATGGAGCCAGAACCCAGAGCCATTGATTTTGGGATGTGGGTTGGCTGATGGTGGTGGCAAAGACGCAGATGGAAGGCAATGGAGCCCTGATAACAAGTACGTATCAGGAGGTGATTCCAGCACATTCAGAGCCTCGTACCAAGACCCGTCGGTGTTGTCCGAGGTTCCATACATGACGGCTCGAGTTTTCAAATCCGAGGCCACATATAAATTCCCTGTTAGCCCTGACAAGCGTTACTGGCTTAGGCTTCACTTTTATCCCTCTGTTTACGGAAATTTCAATCCAACCAATTCATATTTCTCGGTCACTGCAAATGGGGTCACCCTCTTGAGCAATTTCAGTGCCTCCGTTACTTGTCAAGCCCTGTCACAAGCCTACATCGACAGAGAATATTCCCTTGCCCCTCTGAACTCGGATTCTCTCACGCTTAACTTCAAGCCTTCTGACAAGTACAAGGGGGCTTTCGCTTTTGTGAATGGCATTCAACTTATTGAAATGCCAGAGTTGTTTGATTCGGCCACAATGGTGGGTTTTGACCAACCCATGGACACCAAAAGTATGCATTTGCAGACAATGTTTAGACTCAATGTTGGGGGACAGTACATATCCCCATCCCAAGACTCTGGTCTTACGAGGATGTGGTACGATGACACACCGTATCTCTTCGGTGCATCTGTTGGTGTGACCACCGAGGCAGCCAAGGACGTCCAAATCAACTACCAAAGCATGCAACAATACATTGCTCCTCCTACTGTCTACTCCACATCAAGATCAATGGGGAGCAATAAGGACGTGAATATGGGGTATAACCTCACATGGATTTTCCAAGTGGATCCTAATTCCATGTACCTTACAAGGTTACACTTCTGTGATTACACCTTTGACAGGATCAACGAAATCGCATTCAATATATACGTGAACAATCAAACAGCCCAGGCCGGAGCGGATGTGATTGGGTGGACGGGAGGTAAAGGTGTGACAGCTTACAAGGACTATGTAATATATGTTCAGGATGGACCTGGCACTAACCAACTGTGGCTTGCTCTCCACCCTGCAACTGAAACAAAGCCTGAATACTATGATGCAATTCTAAATGGGGTTGAGATATTCAAGCTCAATGATACAAACTTGTCGGGACCCAATCCTCAGCCTTCGGACATGCTAATGAAAGCGGAGGAGCAGCAGTCAAACACTTTCCGAAATAAGGATCAAAGTAATAATCATCCCGTTGTAATTGGAGGAGCTGCAGGAGGTGCTGCTTTACTGGCTGCAATATGCATTGCGGTTTACCAGAGGAAGAGGAGAGTCCCGGGATCGGAGTCTCACACATCAAGCTGGCTTCCAATCTATGGGAATTCCCAAAGTGCCAGCAAATCCACAAGCTCTGGGAAGAGCAGTATTAGTGCTAACTTATCAGCCACGGCTCAAGGTCTATGCCGGTATTTTTCGTTGCAAGAGATGAAGCAAGCGACTAAGAATTTCGATGAGTCCAATGTAATTGGGGTTGGAGGATTTGGGAAGGTATACAAGGGTGTGATTGATAATGGGTTTAAAGTGGCAATCAAGAAGTCGAATCCGCAATCGGAACAAGGCGTTCATGAATTCCAGACTGAAATTGAGATGCTTTCCAAGCTCAGACACAAGCATTTGGTGTCCTTGATTGGGTTCTGTGAGGAAGATGGCGAAATGTGTCTGGTTTATGACTACATGGCTCATGGCACTTTAAGAGAACATATTTACAAGGGAAACAAACCTCTCAACACTCTATCTTGGAAGCAAAGGTTGGAGATCTGCATTGGAGCTGCTAGAGGACTTCACTACCTTCACACTGGGGCTAAGTACACCATCATTCATAGAGATGTCAAAACAACCAATATTCTATTGGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGCTTGTCCAAAACTGGTCCAAACATGAACAATGGCCACGTCAGCACGGTGGTGAAGGGTAGCTTTGGCTACTTGGATCCTGAATATTTCAGGAGACAACAGTTGACTGAGAAGTCTGATGTTTATTCATTTGGGGTTGTTCTGTTTGAGGTGCTCTGTGCAAGGCCCGCTCTGAATCCTGGCCTTTCCAAGGAACAGGTGAGTCTGGCGGATTGGGCTTTGCACAACAAAAGAAAAGGGACTCTGGAAGATATTATAGACCCAAATCTCAAAGGAAAGGTCAATCCAGAGAGCTTGAAGAAGTTTGCAGATACGGCTGAGAAGTGCTTGTCAGATCATGGAGTACATCGTCCCTCCATGAACGATCTGTTGTGGAATCTGGAACTTGCTCTACAGCTGCAGGAAAATCCTGGTGGTTCAAACAAGTCTTCTTCGCGTATTGATGATGAAAGCGAGTTTGAAGATATAAACTTGAAAAGCAACGACACAGCAGCACACTACAAGAATCTAAGCCTTGGGAGCGAGTATGACATGAGCCAGGAGTCGGGGGAGAATTCCAATGCCATCTTCTCACAAATTGTCGATCCAAAAGGGCGATGA 2592 0.4583 MNETIRLLVLLSVLCLSVLFNALHVWSQNPEPLILGCGLADGGGKDADGRQWSPDNKYVSGGDSSTFRASYQDPSVLSEVPYMTARVFKSEATYKFPVSPDKRYWLRLHFYPSVYGNFNPTNSYFSVTANGVTLLSNFSASVTCQALSQAYIDREYSLAPLNSDSLTLNFKPSDKYKGAFAFVNGIQLIEMPELFDSATMVGFDQPMDTKSMHLQTMFRLNVGGQYISPSQDSGLTRMWYDDTPYLFGASVGVTTEAAKDVQINYQSMQQYIAPPTVYSTSRSMGSNKDVNMGYNLTWIFQVDPNSMYLTRLHFCDYTFDRINEIAFNIYVNNQTAQAGADVIGWTGGKGVTAYKDYVIYVQDGPGTNQLWLALHPATETKPEYYDAILNGVEIFKLNDTNLSGPNPQPSDMLMKAEEQQSNTFRNKDQSNNHPVVIGGAAGGAALLAAICIAVYQRKRRVPGSESHTSSWLPIYGNSQSASKSTSSGKSSISANLSATAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKKSNPQSEQGVHEFQTEIEMLSKLRHKHLVSLIGFCEEDGEMCLVYDYMAHGTLREHIYKGNKPLNTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPGLSKEQVSLADWALHNKRKGTLEDIIDPNLKGKVNPESLKKFADTAEKCLSDHGVHRPSMNDLLWNLELALQLQENPGGSNKSSSRIDDESEFEDINLKSNDTAAHYKNLSLGSEYDMSQESGENSNAIFSQIVDPKGR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0260 863 Gene3D - 212 398 - -
Dere02g0260 863 Gene3D - 37 192 - -
Dere02g0260 863 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0260 863 CDD STKc_IRAK 525 792 - -
Dere02g0260 863 Gene3D Phosphorylase Kinase; domain 1 478 594 - -
Dere02g0260 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Dere02g0260 863 Gene3D Transferase(Phosphotransferase) domain 1 595 815 - -
Dere02g0260 863 ProSiteProfiles Protein kinase domain profile. 519 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0260 863 FunFam receptor-like protein kinase FERONIA 480 594 - -
Dere02g0260 863 MobiDBLite consensus disorder prediction 799 819 - -
Dere02g0260 863 FunFam FERONIA receptor-like kinase 212 398 - -
Dere02g0260 863 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Dere02g0260 863 SUPERFAMILY Protein kinase-like (PK-like) 494 793 IPR011009 -
Dere02g0260 863 MobiDBLite consensus disorder prediction 841 856 - -
Dere02g0260 863 FunFam Receptor-like protein kinase FERONIA 595 811 - -
Dere02g0260 863 Pfam Malectin-like domain 36 396 IPR024788 -
Dere02g0260 863 PANTHER OS07G0166700 PROTEIN 503 798 IPR045272 GO:0004714|GO:0006468
Dere02g0260 863 FunFam FERONIA receptor-like kinase 32 192 - -
Dere02g0260 863 Pfam Protein tyrosine and serine/threonine kinase 523 788 IPR001245 GO:0004672|GO:0006468
Dere02g0260 863 MobiDBLite consensus disorder prediction 841 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0260 Dere-ChrDere02 2613594 2616185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0260 31 863 Receptor kinase-like Gene Family AT3G51550 53.846 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere02g0260 Malectin_like 4.9e-37 CL0202