Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0245 ATGGAGAAGGCGAGCAAATGGATAAGAAATTATCTTATGGGGAAAAAGGAAGAGAAATTCAAGACTGACACGTCCTTCAAAGAGAACAAGATTGTTGGAAGTCCCAAGGTGAAGCGCAGATGGAGCTTTGGAAGAATGACAGGCAAGGTAGCTATGCATAGATTTTCCACATGTTTTGATTCAAGCGACTCCGCTTACCTGCAAATACAATCAATGGTGCAAACTGAGCCTCCAAAGGGTCTTTCAACAACACTAGCAGAGATTCCTATAGACATTGAAAGCACTGCTGCTACAAAGATTCAGGCTGCTTTTCGCTCATATCTGGCAAGAAAAGCATTGCACGCTTTAAGGGGACTGGTGAAGATACAAGCACTAGTGAGAGGTCACCTTGTAAGGAAACAAACAAGTGCTACTCTGCGAGGCATGCATGCCTTGATGGCCATACAAGTTAGAGCCAGAATTCACAGAATTCAGACTGCAGAAGAAGCGAACTTTCTCCTTCACAAACACTCCTCCCAATACGGCCAAATCCCACGGGGTAAAGGTCTCCCAAGAGAATTTAAAGATTCAAAGGATATGAGCCTAAGAGAATTGCTGGAAGTTATGGAAAGCAGAAGCGGCCCTTTAGATCCTTCAGATTCAGAGCATGTTGCCGTTTTATTCTATTCGAAGCAAAAATATCAGTACAAGGAAAATGCTTTAATCACAGAACCAGGCAGCTCAGGGAACAACTTATACAGTAGCCAGCGCTATTCAGTGTCATGGGCACCCAATTACCTGCCCAAGACAGAATCCTCAAGGGCCAAAGCTAGGTCTCTCAGTGAACCAAAACAACGACCCAAACGACGTACGATGCACAAAAACAGGTCTATAGAATCTACGAAAGACTTGACTTTTTCATTGGATGGTCGAAGGCAATCTCTGTCCTCAAATTCCTCACGCTTCGTCAATCATGGAAGCTTGGACCATTGGGCTTTGAACCATTACGAGTCATTGACGGACAGCAAGAGTGATTCCTTCAGCAGCAGCGTGGCGACTTTTGATTCTTCAAATTGA 1056 0.4422 MEKASKWIRNYLMGKKEEKFKTDTSFKENKIVGSPKVKRRWSFGRMTGKVAMHRFSTCFDSSDSAYLQIQSMVQTEPPKGLSTTLAEIPIDIESTAATKIQAAFRSYLARKALHALRGLVKIQALVRGHLVRKQTSATLRGMHALMAIQVRARIHRIQTAEEANFLLHKHSSQYGQIPRGKGLPREFKDSKDMSLRELLEVMESRSGPLDPSDSEHVAVLFYSKQKYQYKENALITEPGSSGNNLYSSQRYSVSWAPNYLPKTESSRAKARSLSEPKQRPKRRTMHKNRSIESTKDLTFSLDGRRQSLSSNSSRFVNHGSLDHWALNHYESLTDSKSDSFSSSVATFDSSN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0245 351 Pfam IQ calmodulin-binding motif 96 113 IPR000048 GO:0005515
Dere02g0245 351 Pfam IQ calmodulin-binding motif 120 134 IPR000048 GO:0005515
Dere02g0245 351 PANTHER IQ-DOMAIN 5-RELATED 1 309 - -
Dere02g0245 351 Pfam Protein of unknown function (DUF4005) 254 310 IPR025064 -
Dere02g0245 351 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Dere02g0245 351 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Dere02g0245 351 MobiDBLite consensus disorder prediction 262 296 - -
Dere02g0245 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 135 IPR027417 -
Dere02g0245 351 Gene3D - 91 144 - -
Dere02g0245 351 SMART iq_5 92 114 IPR000048 GO:0005515
Dere02g0245 351 SMART iq_5 115 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0245 Dere-ChrDere02 2513173 2514493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0245 1 280 IQD Protein Family AT4G14750 34.754 1.63e-33 127