Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0241 ATGTTCAACGGAGTGCCAAGAGCAGTTCCACCAATTCATAGCTCCAAGAAGCACACTTCCTCTTCTCCTGTCTCTTTCCCTCCCTTTGATGCTTACAACCCTTCTCATCATCTCTTGCCACTCCCACCACCACCACCAAATCTCTTAGACCCACTGCACCACAAGGATGAACAACACAAGCAGGAAGAAAATAGCATGAACCTGGACACTAATGCAAGGAAAGGACAATTAGGTGAGCATGAACTGGAGCTGCTTGATTCCTGGACCAACGATGAAATGATTGCTCTTTTGAGGATCAGATCTAGCATGGAAACTTGGTTCCCTGACCTCACTTGGGAACGTGTTTCAAGGAAGCTAGCAGAAGTCGGATTTAAGACGAGTGCGGACAAGTGCAAGGAGAAATTCGAAGAAGAAACTAGATTCTTCAACAACAACATTCATTACACCAAGAACGATAATTACCGCTTTGTTAGTGAGCTCGAACAGCTTTATCAACAACAAGAAGCAAATCAAATTCCTGAGGATGAGGCTGGGTCTCAATGGAGCAAACAGCTGCTGGAAAAGCCAGCCCAGGAACAACACAGGAAGATGGATCACGCGTTAGAAGAGGGGTCGGGATATAACGCCGCCTCATTGACCGAACAATACGAGGAGAGTGTGAAAGCGGTTGAAAAATCAAAGTACAGGAAGAGAAAGAGGCATGACAAGCTTGAGATGTTGAAGGGTTTTTGTGAGAACATTGTGAACAAAATGATGGCACAACAAGAAGAAATGCAGAAGAAGCTCCTGGAGGACATGCTTAAAAGAGACCAAGAGAAGTTCGCAAGAGAGGAAGCTTGGAAGAAGCAAGAAATAGATAGAATGAACAGGGAGCTCGAAATGATGGCGAAAGAGCAGGCTATTGCGGGCGATAGACAAGCCGCCATAATGGAGTTCTTGAAGAAGTTTTCAGACCAATGCCACCATATCAAAACGGTATCAAACGGTTCGGACCCAAATTCTCTTACTTCTTCCTCGTTGAACTCACAAAACCCTAACCCTTCTTGTAATTACATTGAGAAGAACATTCCCGAGCCGCCGCCTATTTCTACTACTGTGGTTCTTAATTACGAAGATACAACAGATGAAAACCCTCATAGTTCCAGCGTATTTCCTTCTTCATCTAATGGCGCTCTAGTTCCCCATAACCCTAACTCTCTCATTACCCAGTACAATCCATCGCCAGCCCAATCAGTTTCGACGCATAAAACCTGCTCGAATAATTCTATTTCCACCGAGAAGGATGAGGTTGGAAGAAGATGGCCAAGAGAGGAAGTGTTGGCTCTCATAAACCTGAGGTGCAGTTTGAATAATAACAGTAATAATGAAGAGAAAGATGGAGGAAGCAGGATTCCTCTGTGGGAGAGAATATCGCAAGGGATGTGGGAGTTGGGGTACAAGAGAAGCGCCAAGAGGTGCAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACAAAGGATGTTAGTAAGAAGAGGTCGCTTGATTCTAGAACCTGTCCCTACTTCCATCAACTCACTACTTTGTATAGTCAAGGCAAACTGATGAATTCAGAGTCTCATGAGAACCTGGAAAATCGCTCACCTCATACTTCTCATCAACTGGACTCTCATGCATCAGGTGACGACAAAACTTTGATTCAACAACTACCTCCTCCTCCTTCTGCTTCAGATTATATTCCCTTGTAA 1731 0.4431 MFNGVPRAVPPIHSSKKHTSSSPVSFPPFDAYNPSHHLLPLPPPPPNLLDPLHHKDEQHKQEENSMNLDTNARKGQLGEHELELLDSWTNDEMIALLRIRSSMETWFPDLTWERVSRKLAEVGFKTSADKCKEKFEEETRFFNNNIHYTKNDNYRFVSELEQLYQQQEANQIPEDEAGSQWSKQLLEKPAQEQHRKMDHALEEGSGYNAASLTEQYEESVKAVEKSKYRKRKRHDKLEMLKGFCENIVNKMMAQQEEMQKKLLEDMLKRDQEKFAREEAWKKQEIDRMNRELEMMAKEQAIAGDRQAAIMEFLKKFSDQCHHIKTVSNGSDPNSLTSSSLNSQNPNPSCNYIEKNIPEPPPISTTVVLNYEDTTDENPHSSSVFPSSSNGALVPHNPNSLITQYNPSPAQSVSTHKTCSNNSISTEKDEVGRRWPREEVLALINLRCSLNNNSNNEEKDGGSRIPLWERISQGMWELGYKRSAKRCKEKWENINKYFRKTKDVSKKRSLDSRTCPYFHQLTTLYSQGKLMNSESHENLENRSPHTSHQLDSHASGDDKTLIQQLPPPPSASDYIPL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0241 576 MobiDBLite consensus disorder prediction 534 554 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 324 351 - -
Dere02g0241 576 Pfam Myb/SANT-like DNA-binding domain 86 161 IPR044822 -
Dere02g0241 576 Pfam Myb/SANT-like DNA-binding domain 432 522 IPR044822 -
Dere02g0241 576 MobiDBLite consensus disorder prediction 50 67 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 324 360 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 14 28 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 1 73 - -
Dere02g0241 576 Gene3D - 88 143 - -
Dere02g0241 576 Gene3D - 434 499 - -
Dere02g0241 576 ProSiteProfiles Myb-like domain profile. 426 494 IPR001005 -
Dere02g0241 576 PANTHER FI21293P1 47 547 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 533 576 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 406 430 - -
Dere02g0241 576 Coils Coil 253 273 - -
Dere02g0241 576 CDD GT1 432 501 - -
Dere02g0241 576 FunFam Trihelix transcription factor GT-2 434 499 - -
Dere02g0241 576 MobiDBLite consensus disorder prediction 406 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0241 Dere-ChrDere02 2469007 2471192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0241 88 526 Trihelix Transcription Factor Family AT5G28300 41.718 6.32e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere02g0241 Myb_DNA-bind_4 2.5e-18 CL0123