Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0223 ATGTGGACCTCATTTCATCCCAAGCTCGCAGCAAAAGGCACGTGCCTCATCCCCTTGCACGTGTACATGAATGGTTCCATCTTTCGGAGCTGCAGTGTTGGTGGTGTTTTGCTGGTAATTGTTACCACGGGACTTCTGCTCCACCCTGCACCTCACAGCTCACTGAAAAGCATGGCGGACAAGGCTGTTACTATCCGAACCAGGAAGTTCATGACCAACAGGCTTCTATCAAGGAAACAATTTATCATTGACGTCCTTCACCCAGGGAGGCCAAATGTTTCCAAGGCTGAGCTTAAGGAGAAGCTAGCAAGGATGTATGAAGTCAAAGACGCTAATGCAATTTTTGTCTTCAAGTTTAGAACTCACTTTGGAGGTGGGAAATCAACTGGGTTTGGTTTAATCTATGACTCTGTTGAAAATGCGAAGAAGTATGAGCCCAAGTACAGACTTATCAGGAATGGACTTGATACCAAGGTGGAGAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCCAAGAAGATTCGTGGAGTAAAGAAGACCAAGGCTTCTGATGCTGCCAAGGGCGGAAAGAAGAAATGA 585 0.4581 MWTSFHPKLAAKGTCLIPLHVYMNGSIFRSCSVGGVLLVIVTTGLLLHPAPHSSLKSMADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLARMYEVKDANAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKGGKKK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0223 194 FunFam 40S ribosomal protein S24 58 194 - -
Dere02g0223 194 Pfam Ribosomal protein S24e 83 160 IPR001976 GO:0003735|GO:0005840|GO:0006412
Dere02g0223 194 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 63 165 IPR012678 GO:0003735|GO:0005840|GO:0006412
Dere02g0223 194 Hamap 30S ribosomal protein S24e [rps24e]. 61 163 IPR001976 GO:0003735|GO:0005840|GO:0006412
Dere02g0223 194 MobiDBLite consensus disorder prediction 155 194 - -
Dere02g0223 194 PANTHER 40S RIBOSOMAL PROTEIN S24 58 188 IPR001976 GO:0003735|GO:0005840|GO:0006412
Dere02g0223 194 ProSitePatterns Ribosomal protein S24e signature. 123 145 IPR018098 -
Dere02g0223 194 Gene3D - 55 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0223 Dere-ChrDere02 2299483 2302166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0223 58 189 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.879 6.18e-83 240