Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0218 ATGGAGTCAAAGTACTGTAAAACATGTGATTATCCCACTACCATTATAAATATGCTACCTCCAAATATAAAACCATATCTCAAAGTAGCGAACTCTCTCAATTTTTTGCATTGGCAATATTCCTTTTCTCGTAACATGGCTCAATCATCTCCTTTTGATCTTGTGTTCACTGTAAGGAGGCGCCAACCAGAATTGGTAGCTCCCGCTAAGCCCACCCCCCGTGAATTTAAGCTACTCTCTGACATTGATGATCAAGATGGGCTACGATTTCAAGTTCCATTGATACATTTTTATCCTTACAAGCCTTCCATGGCAGGGAAGGACCCAGCTCAACTCATCAAAAAGGCGCTTGCTGAAATTCTAGTCTTTTACTACCCATTCGCAGGTCGACTTAGGGAAGGTCCTACCCGCAAACTTATGGTTGATTGTAATGGAGAGGGCGTCTTGTTCATTGAAGCTGATGCAGATGTCACGCTTCACCAATTTGGTGACTCTCTTCAACCTCCATTCCCCTGCTTTGAAGAGCTCCTTTACAATGTCCCTGGCTCAGATGGAGTCATTAACTGTCCCCTCCTAGTGATACAGGTTACACGCCTCAAGTGTGGTGGTTTCATCTTTGCCACCCGCTTAAACCACACTATGTGTGATGGGCCTGGTGTGGTGCAATTCCTAAAGGGCTTAGCGGAGATTGCCCAGGGTGCTTCTGAACCTTCTGTCCCACCTGTGTGGCGTAGAGAGCTCCTAAATGCAAGGGACCCACCCCGTATTACATGCACCCACAACGAGTACAAGGAAGTGCCTGAGCCTGATGATACAAAAAGGACCCAACCTATGGTCCAACGCTCTTTCTTCTTTGGACCAAGCAAGTTAGCGACCCTCCGCGAAATGATTCCCCATCACCGATGCACTAACTTTGAGGTGCTTTCGGCCTTCCTCTGGCGTTGCCGCACCATAGCATTGCAGGTTGAACCAGATGAGGAGGTTCGCTTTATGTGCATTAGCAACGTGCGGGGTAAGCCCAACGCTCCGTTATTGCCGGTTGGTTATTATGGCAATGGTTTTGTGTTCCCAGCTGCAGTCACCACCGCAGGGAAGCTCTGCGGAAATTCATTAGGGTATGCCTTGGAGCTGGTAAAGTTTGCAAAGGGTGAGGCAACGGAGGAGTATGTACGATCTGTAGCAGATCTTATGGTGATTAGAGGACGACCCTGCTTTACTCTGGTAAGGTCGTGGATTGTCTCAGATATTACGCGTGCTGGGCTTAGAGATGTAGATTTTGGATGGGGCAAGGCGGTTTATGGGGGAGCAGCAATGGCTGGGGCTGGTACTTTTCCTGGAGTAAGCTTTTTCGTTTCATGTAAGAATGCTAAAGGAGAGGAAGGTATAGTAATACCATTGTGCTTGCCAGCCAAAGCAATGGAGAGGCTCGCCCAAGAGGTGGATAAGACGCTCAGCAACCATAAGAATAATCCTCATACTACAATGATAAGGTCTTTCTTGTAG 1503 0.4744 MESKYCKTCDYPTTIINMLPPNIKPYLKVANSLNFLHWQYSFSRNMAQSSPFDLVFTVRRRQPELVAPAKPTPREFKLLSDIDDQDGLRFQVPLIHFYPYKPSMAGKDPAQLIKKALAEILVFYYPFAGRLREGPTRKLMVDCNGEGVLFIEADADVTLHQFGDSLQPPFPCFEELLYNVPGSDGVINCPLLVIQVTRLKCGGFIFATRLNHTMCDGPGVVQFLKGLAEIAQGASEPSVPPVWRRELLNARDPPRITCTHNEYKEVPEPDDTKRTQPMVQRSFFFGPSKLATLREMIPHHRCTNFEVLSAFLWRCRTIALQVEPDEEVRFMCISNVRGKPNAPLLPVGYYGNGFVFPAAVTTAGKLCGNSLGYALELVKFAKGEATEEYVRSVADLMVIRGRPCFTLVRSWIVSDITRAGLRDVDFGWGKAVYGGAAMAGAGTFPGVSFFVSCKNAKGEEGIVIPLCLPAKAMERLAQEVDKTLSNHKNNPHTTMIRSFL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0218 500 Coils Coil 470 490 - -
Dere02g0218 500 Gene3D - 54 260 IPR023213 -
Dere02g0218 500 Gene3D - 261 480 IPR023213 -
Dere02g0218 500 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 64 476 - -
Dere02g0218 500 Pfam Transferase family 58 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0218 Dere-ChrDere02 2269545 2271136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0218 58 466 Monolignol Biosynthesis Gene Families AT5G48930 29.630 2.10e-46 165