Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0216 ATGGTTGTGCAATCTCCCTCTGATCTCGTGTTTACTGTGAGAAGGTGTCAACCGGAGCTTGTAGTTCCGGCTAAGCCTGCTCCCCATGAATTTAAGTTACTGTCAGACATAGACGACCAGCATGGTATGCGTTGGCATGTTCCATTGATACACTTCTATCGTCACGAGCCTTCAATGGCGAAGAAAGACCCCGTCAAGGTCATTAGACAGGCATTAGCTCAGACGCTAGTGTTTTATTATCCTTTCGCAGGTAGACTCAGGGAAGGCAATGGCAGCAAACTCATGGTGGAATGTAACGGAGAAGGCGTCCTCTTCATTGAGGCTGATGCAGATGTAACGCTTCTCCAGTTTGGTGACTCTTTTCAACCTCCATTCCCATGCTTCGAAGACCTCCTTTATGATGTTCCCGGTTCTAAAGGAATCCTTCACTCTCCTCTCTTACTTATCCAGGTAACGCGCCTCAAGTGTGGTAGTTTCGTCTTTGCTATTCGCATGAATCACACTATGAGCGATGCATTTGGCATCGTCCAATTCATGAATGCCTTAGCGGAAATAGCTAATGGGGCAAATGAACCCTCCATTCTGCCCGTGTGGCATAGTGAGCTTCTAAGTGCAAGGGACCCACCACGCATTACATGCACCCATCATGAGTTCGAAAAAGTCAGTGGTACGATAATCCCCTCAACAGACATAGCCCATCAGGCTTTCTTCTTTGGGCCAACTGAGATATCTGCCATCCGTCGTCTAAATCCGCATCACCTTAGTAAATCCACAACATTTGAGGTGCTCACAGCATGCCTATGGCGTTGTCGCACAAAAGCTTTACAATTAGACCCACGTGATGATGTTCGCGTGATAATCATCGTCAATGCTCGTCTTAGACGAGGCAAGTTTAAGTTTTCAATTCCAACAGGTTATTATGGCAATGCTTTCGTGTATCCAACTGCAGTTACCACTGCAGGGAAACTCTGCGAGAGTCCATTAGAATATGCCTTGGAGTTAGTGAAGAAAGCCAAAGCTCAAGCGAGTGAGGAGTATGTGCACTCCATGGCTGATCTCATGGTAACCAAAGGACGACCATGTTTCACAACAGCAAGATCATGGATGGTATCAGATTTGACACGTGCTGGATTTAGAGACGTTAATTTTGGGTGGGGCAAGGCAGTGTATGCAGGTCCAGCTGAAGGTGGGCTTGGGTCAATTCCTGGAGTGAGTTTTTACGTTGCATCTACCAACAATAAAGGAGAGGAAGGCAGAGTAGTACCTATTTGCTTGCCCTCCAAAGCCATGAAGAGATTCGCCAAAGAGTTGGATAACATGCTTGGCGGCCATAACGATATTGATGATCATTCCAGAATTATTAGGTCGTTTCTGTAG 1377 0.4641 MVVQSPSDLVFTVRRCQPELVVPAKPAPHEFKLLSDIDDQHGMRWHVPLIHFYRHEPSMAKKDPVKVIRQALAQTLVFYYPFAGRLREGNGSKLMVECNGEGVLFIEADADVTLLQFGDSFQPPFPCFEDLLYDVPGSKGILHSPLLLIQVTRLKCGSFVFAIRMNHTMSDAFGIVQFMNALAEIANGANEPSILPVWHSELLSARDPPRITCTHHEFEKVSGTIIPSTDIAHQAFFFGPTEISAIRRLNPHHLSKSTTFEVLTACLWRCRTKALQLDPRDDVRVIIIVNARLRRGKFKFSIPTGYYGNAFVYPTAVTTAGKLCESPLEYALELVKKAKAQASEEYVHSMADLMVTKGRPCFTTARSWMVSDLTRAGFRDVNFGWGKAVYAGPAEGGLGSIPGVSFYVASTNNKGEEGRVVPICLPSKAMKRFAKELDNMLGGHNDIDDHSRIIRSFL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0216 458 Gene3D - 9 219 IPR023213 -
Dere02g0216 458 PANTHER ACYL TRANSFERASE 4 11 441 - -
Dere02g0216 458 Gene3D - 220 437 IPR023213 -
Dere02g0216 458 Pfam Transferase family 16 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0216 Dere-ChrDere02 2261479 2262980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0216 44 437 Monolignol Biosynthesis Gene Families AT5G48930 30.622 6.33e-49 171