Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0194 ATGGGGTGTGTGATTAGTCGAGAAGCGTCATCGGAAATAACCTCTGAGGTGAAAGAGGAGAGGAATTTGAGTGCTGAATCGAACGGGAAGGTAGATGAAGTCTCCGCGAGGAAAGCTGAGGGAAACATGGTTGAGGTTCAGAACGGTGAGAACCAGAAGGAAGGGAAGGATGGTGATGAGGGGATCCAGGTCCAGCGGCCACGGGGGGGAAGAAGAAGATCAAAGCCAAACCCAAGGCTTAGTAACCCTCCAAAGCATTTGCGGGGGGAGCAAGTAGCAGCTGGGTGGCCACCCTGGCTTACGGCAGTGTGTGGGGAAGCACTTAATGGGTGGATTCCTCGGAAGGCTGACACATTTGAGAAAATTGATAAGATTGGGCAAGGAACGTATAGCAATGTGTACAAAGCTAAAGACATGTTGACTGGTAAGATTGTTGCGTTAAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTGAAGTTCATGGCTAGAGAAATTCTTATTTTGCGAAGATTGGATCATCCCAATGTTGTAAAGTTGGAAGGTTTAGTTACATCAAGAATGTCCTGTAGTTTGTATTTGGTGTTTAATTACATGGAGCATGATTTAGCTGGACTTGCTGCAAGCCCAGGAATCAAGTTCACAGAGCCTCAGGTCAAATGTTTCATGCGCCAACTATTATCAGGACTTGAGCACTGTCATAACCATCGAGTGCTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACGATGGAGGAATACTTAGGATAGCTGACTTTGGATTAGCCTCTTTCTTTGATCCAAACCGCAAGCAGCCCATGACTAATCGTGTAGTTACACTTTGGTACCGACCTCCTGAGTTGCTTCTTGGTGCTACAGAATATGGTGTGGGTGTGGACCTTTGGAGTGCAGGTTGCATTTTAGGGGAGTTATTGGCTGGGAAGCCAATTATGCCTGGCCGCACAGAGGTTGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCAGATGAGTACTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACATTTAAAGATTTTCCACCTTCTGCACTTTCCCTTATTGATACTCTTCTTGCAACTGATCCAGCAGAACGGAAGACTGCCTCAGATGCCCTGAGAAGTGAGTTCTTCACAACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATATCCTCCAAGCAAGGAAATGGATGCGAAACGACGTGATGATGAAGCAAGGAGATTACGAGCTGCAGGCAAAGCTCTGGTTGATGGTGCAAAGAAACCACGAACACGTAATCGTGCTAAAGCAAACCCTGCTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCATTATTGATAGAAGGCGTCTGATCACTCGTGCAAATGCAAAGAGCAAGAGTGAAAAGTTCCCTCCACCGCATCAAGATGGACAACTTGGCTTCCCCTTGGGATCTTCACATCATTTTGATTCAGACAACGTTCCTCCGGAAGTCTCTTTCAGTTCAAGTTCATTTACCTATTCAAAAGAACCATTCCAGGCTTGGTCAGGTCCCATTGCTGCACCCAAGCGGAAGAAACATGCCACAGGGGATACATTGGATTTATCAAAACAACATACAAGTGCACTCAAGGATAACGTTAAAGGAAAGAAATCCATAGCATAG 1731 0.4523 MGCVISREASSEITSEVKEERNLSAESNGKVDEVSARKAEGNMVEVQNGENQKEGKDGDEGIQVQRPRGGRRRSKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFNYMEHDLAGLAASPGIKFTEPQVKCFMRQLLSGLEHCHNHRVLHRDIKGSNLLIDDGGILRIADFGLASFFDPNRKQPMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKDFPPSALSLIDTLLATDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRLRAAGKALVDGAKKPRTRNRAKANPAPAPEANAELQSIIDRRRLITRANAKSKSEKFPPPHQDGQLGFPLGSSHHFDSDNVPPEVSFSSSSFTYSKEPFQAWSGPIAAPKRKKHATGDTLDLSKQHTSALKDNVKGKKSIA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0194 576 Gene3D Transferase(Phosphotransferase) domain 1 202 442 - -
Dere02g0194 576 MobiDBLite consensus disorder prediction 421 452 - -
Dere02g0194 576 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Dere02g0194 576 MobiDBLite consensus disorder prediction 517 533 - -
Dere02g0194 576 MobiDBLite consensus disorder prediction 471 493 - -
Dere02g0194 576 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
Dere02g0194 576 MobiDBLite consensus disorder prediction 410 576 - -
Dere02g0194 576 MobiDBLite consensus disorder prediction 1 91 - -
Dere02g0194 576 CDD STKc_CDK9_like 119 403 - -
Dere02g0194 576 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Dere02g0194 576 MobiDBLite consensus disorder prediction 50 67 - -
Dere02g0194 576 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Dere02g0194 576 MobiDBLite consensus disorder prediction 12 39 - -
Dere02g0194 576 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Dere02g0194 576 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0194 576 SUPERFAMILY Protein kinase-like (PK-like) 113 410 IPR011009 -
Dere02g0194 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Dere02g0194 576 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0194 576 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0194 Dere-ChrDere02 1890067 1894023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0194 111 441 Core Cell Cycle Gene Families AT5G10270 51.585 2.46e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere02g0194 Pkinase 4.7e-66 CL0016