Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0162 ATGTGGAACTGGAACCAGTATTTCCATTATTGGAAGGCCATCCCTGCGAATGCCAACTCTTGCTATAACAGAGACCTCCAAATGGCTTTTGATGAAGCCACTGCCACTCCTCCTTTCTTACCACTTGGAGTTTCATTGTCGTCTCTCGACACCAGAACCATTGTCGCCCTCTGTGTCTTCTTCACAATTCTCTGCGCTTGCCTCATTATTGGCCATCTTCTCGAAGAACACCGATGGGCCAATGAATCCATCACCGCACTCCTTCTGGGGTTGTGTTCTGGAGTAGTAGTGTTGCTGGTGACCAAGTTCAGTAACTCCCAATTCCTAAAATTCAGCGAAAACTTGTTCTTTCTTTACTTGCTTCCCCCAATAATTTTTAACGCTGGTTTCCAAGTGAAGAAGAAGCAATTCTTCAGGAATTTTACAACAATTCTGCTGTTCGGAGTCGTTGGAACAGTTATTTCATTCTGTTTCATATCAGTTGGTGCGTTTCTACTGCTCAGGAGGCTTGGTATAGAGAACCTGAAAATGAAAGATTACCTAGCCATTGGTGCCATATTCTCAGCTACTGATTCAGTCTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCATCGTATTTGGGGAGGGAGTAGTAAATGACGCTACTTCTATTGTACTTTTCAATTCAGTCCAGTCAATTGATTTTAGCAGCAATAATGCTATTACAGCCTTGAAATTGGTGGGGACCTTCCTTTACCTCTTCTTCACTAGCACTGCCCTTGGTATAGTAGTTGGCCTTTTGAGTGCTTATACTATTAAAACACTCTACTTTGGAAGGCATTCTACTGATCGTGAAGTTGCACTCATGATGCTTATGGCATATTTGTCATACATGATTGCTGAGCTTTTGAATCTCAGTGGGATTTTGACAATTTTCTTTTGTGGCATTGTCATGTCACACTACACATGGCACAATGTTACAGAAAGCTCAAGGATAACTACCAAGCATTCCTTTGCAACTATTTCATTCATTGCTGAAACCTTTATATTTCTATATGTTGGCATGGATGCTTTGGACATTGAAAAATGGAAAACCAGCGAAGCAAGCGTAGGGACTTCAATTGCTGTCAGTTCAACTTTGTTCGCATTAGTGTTGATTGGAAGGGCAGCTTTTGTCTTTCCTATTGCAAACATTAAAAATTGCATCAAGACAAGAGAGAATACCAAAATTGAGTTCCGGTCCCAGTTTATAATATGGTGGGCAGGCCTATTGAGAGGTGCAGTGACTATAGCCTTGTCGTATAGCCAGTTCGAAAATTCTGGGAAAGAACCAGCTCCAGATAATGCACTGGTGATGACCTCTACTATAATCGTCGTTTTATTCAGTACTGTGGTTTTTGGTTCCGTAACAAAGCCTCTGATTGAGGCGGTGCTGCTAAGGCATTCAAGAACACCCATTTCTGATTCCACTGAAAATGAAGAGGATCTGAGATTGCTACTCCTTGAAAATGGTGGTCCCAGTGACCGAGGCAACAATCAGGCGGGCAGGCAAAGCAGCCTAAGTTTGCTGATGAGACATCCCACCTCAACCGTTCACTACTTTTGGAGGAAATTTGACGATAGAATTATGAGACCAGTATTTGGTGGAAGGGGTTTTGTTCCATTGCTTCCTGTTTCACCATCTGATTCTGGTGCAGTAGCGGAGACTTCTCGAAACAATTAA 1719 0.4241 MWNWNQYFHYWKAIPANANSCYNRDLQMAFDEATATPPFLPLGVSLSSLDTRTIVALCVFFTILCACLIIGHLLEEHRWANESITALLLGLCSGVVVLLVTKFSNSQFLKFSENLFFLYLLPPIIFNAGFQVKKKQFFRNFTTILLFGVVGTVISFCFISVGAFLLLRRLGIENLKMKDYLAIGAIFSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQSIDFSSNNAITALKLVGTFLYLFFTSTALGIVVGLLSAYTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTESSRITTKHSFATISFIAETFIFLYVGMDALDIEKWKTSEASVGTSIAVSSTLFALVLIGRAAFVFPIANIKNCIKTRENTKIEFRSQFIIWWAGLLRGAVTIALSYSQFENSGKEPAPDNALVMTSTIIVVLFSTVVFGSVTKPLIEAVLLRHSRTPISDSTENEEDLRLLLLENGGPSDRGNNQAGRQSSLSLLMRHPTSTVHYFWRKFDDRIMRPVFGGRGFVPLLPVSPSDSGAVAETSRNN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0162 572 PANTHER SODIUM/HYDROGEN EXCHANGER 54 546 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Dere02g0162 572 Pfam Sodium/hydrogen exchanger family 63 474 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere02g0162 572 NCBIfam sodium/hydrogen exchanger 3 59 495 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g0162 572 Gene3D - 175 228 - -
Dere02g0162 572 PRINTS Na+/H+ exchanger signature 144 152 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g0162 572 PRINTS Na+/H+ exchanger signature 184 194 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g0162 572 PRINTS Na+/H+ exchanger signature 115 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere02g0162 572 PRINTS Na+/H+ exchanger signature 129 143 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0162 Dere-ChrDere02 1511837 1518411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0162 44 561 Antiporters AT3G05030 61.509 0.0 655