Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0158 ATGGGCTTCATCGCCCATCAACGCAAATGTGGCAGCTCTTCTACTAATTACTCAATCATGTCCTTTTCTTTCCTCATCCTCCTCCTCTCTCCGGCAATCCCTCTCGCCGGAGCACAGGCCGGTAACACTGGCCCCACCGACCCTTACTACAACCGCTTCAGCCCTTCCATGGCCATCATAGTCGTTATTTTAGTCGCCGCTCTTTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCAGTGCACTGATTCCCCAAACAGCAGCGTCAATCCTCTCGCCGGTGTCGCAGGTCGTTCCAGGCGTCAGCTGCGTGGCCTTGATCCTGCGGTCATTGAGACTTTCCCAACTCTGGACTACTCGGCGGTTAAGATTCACAAAATTGGAAAGGGTGCGCTGGAATGCGCCGTGTGCTTGAACGAGTTCGAGGACTCCGAAACGCTGCGTTTGATCCCCAAGTGCGATCACGTCTTCCATCCCGAGTGTATCGACGAGTGGTTGGCTTCCCACACTACCTGTCCGGTTTGCAGAGCCAACCTCGCTCCCCAACCAGGTGACTCTCTTCACGGAGCTCCCGTGATGAACCCCGAGGCTGATGTCGAAGCCCAAAACGACGCCGCTGAACCTGCAGTCCAGCAACCGAATGTGAACGCTGACCCAGAAGTGGCGGAGCCTGACGTGATGTGTTTGAATCAGACGCTGAACCGAAACCGTACGCGAGGGTCTCGGTCGAACAGGACACGGAGGTTCCCAAGGTCACACTCGACCGGTCACTCACTGGTCCAACCGGGGGAAAACACGGACCGGTTCACTTTGAGACTACCGGCGGACGTGATGAATCAGGTACTGAACCGGAAATTTCATCGCGCCACAAGCTTGGTGATCTTGCCTAGGGAAAGTAGTTCGAGGAGGGGATATCGAACCGGGGGTGAGGGTAGTAATAGAGGAAGGTTTTCGAGGCGCCTGGACCGGGGGTTTAAATCGGACCGGTGGGTTTTCACGATGGCGCCGCCGTTCTTAGTGAGGGCATCGTCGGTTAGGTCTCCAAAGGTGGCTAGTACTAGTGCCGCCGGTGAAGATACCACCGCTGACCCCATCATGCCGGCGGCGGCTGTGGATTCGGGCCGGCCTCCGGTTTAA 1137 0.5664 MGFIAHQRKCGSSSTNYSIMSFSFLILLLSPAIPLAGAQAGNTGPTDPYYNRFSPSMAIIVVILVAALFLMGFFSIYIRQCTDSPNSSVNPLAGVAGRSRRQLRGLDPAVIETFPTLDYSAVKIHKIGKGALECAVCLNEFEDSETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLAPQPGDSLHGAPVMNPEADVEAQNDAAEPAVQQPNVNADPEVAEPDVMCLNQTLNRNRTRGSRSNRTRRFPRSHSTGHSLVQPGENTDRFTLRLPADVMNQVLNRKFHRATSLVILPRESSSRRGYRTGGEGSNRGRFSRRLDRGFKSDRWVFTMAPPFLVRASSVRSPKVASTSAAGEDTTADPIMPAAAVDSGRPPV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0158 378 SMART ring_2 134 175 IPR001841 -
Dere02g0158 378 Pfam Ring finger domain 133 176 IPR001841 -
Dere02g0158 378 MobiDBLite consensus disorder prediction 237 264 - -
Dere02g0158 378 SUPERFAMILY RING/U-box 128 183 - -
Dere02g0158 378 FunFam E3 ubiquitin-protein ligase ATL6 95 182 - -
Dere02g0158 378 CDD RING-H2_EL5-like 133 176 - -
Dere02g0158 378 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Dere02g0158 378 PANTHER RING FINGER DOMAIN-CONTAINING 47 184 - -
Dere02g0158 378 MobiDBLite consensus disorder prediction 345 378 - -
Dere02g0158 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 182 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0158 Dere-ChrDere02 1464391 1465527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0158 19 355 Rapid Response to Elicitors AT3G05200 46.512 1.10e-92 281