Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0154 ATGGCGCAACGAGGTAATGGCATGGCCTTCACTCTCCCCTCCTTCAAAACCTCTTCACTTTCATTCTCACTTGTTTTCATCGTACTCTTCTTCCTCCTAAACCCACCTTCTCCCTCTCCCACTCCCTCTACCCACAGGTCACTTCTCTTCACCTCTAATTCCACTGCTTGCTCCTCCGCCAGATCCCACTCCAATGGCCTCATCAACTACTTTGCCATCCATCACTGCCTTTTCCATCAAAACTCCTTTCATTCCATCCCTTTCCTTTTCCTATTCCTCCTTTTACATTTCTATATCCTCATCAAAACTGCCCAAGACCATTTCTCTGTCGTCACCACCAAGCTCGCACTTCACCTCAATTTGTCTCCCAGCATGGGCGCTGTAACCCTCCTGGCCTTGGGTAATGGTGCGCCCGACGTTTTCGCTTCCGTCGCTGCTCTTCGCGGCGGTCAATACCGAACTGGGTTGGGTGCGATTCTTTCTGCCGGAACATTTGTCTCTGCTTTTGTAGTTGGGTTTGTAGCAATTTATGCCGCACCCTTTTCTGTTGATCCCGCACCATTTGTGAGGGATGTCTTATTTTACTTGATCTCGGCCCTGTTCCTCTTCTACGTGTATCTTAGTGCCGAAATTTTTCTATGGCAAGCAATTGGATTTGTGGGGTTTTATTTGTTTTTTGTTGGTTTTGTGTTCTACATGGATTTGGGAATGGGAAGTCGAAGGGAGAAAAGTGGGAACGTGAGGAGCTTTGTTGGAGATCTTGAGGGACAAAAAGAACCGATAACGGCGGGATATGACATCAAAGTTTCAGGAATAGAGGAAAGGAAACACAGTTCTAGATTTCGTCGAGGATTTGAAATGATTTTGGTAATATGGGAGCGTCCTGTCTCACTGCTCTTAAAATTGACAATACCTCAATCTGGGCCATCAGAGTGGAGCAGATTTTATGCATCAGCTAATATTGCTCTTTGTCCACTAGCCATTTTGTATGGCTGCAACTCATTGATGCCCTTTAGTTATCCCATAGTTTTCCTCCTTCCCAACACTCATTTTCCCCTCTGGTTGGTAGTGCTCATGACAAGCTGCTCTCTGGCTCTTCTTCATTTCATAATGGAAAAAGAACCCCCAAAATCTGAGGAAATTCCTGTTGTGCTCATGGCATTTGTGATGAGTGTGTTTTGGATATCTACTGTGGCTGGAGAACTGCTAAACTGCCTGGCAGCATTAGGTACGCTTCTCAAACTGCCACCTGCATTGCTTGGTCTTACAGTGCTAGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGCCATCCAGCCATGGCAATGGCTGGATGCTTTGCTGGGCCAATGTTTAACATGCTTGTGGGGCTTGGGACTGCTCTGGTGATGCAGACTGCCAAAGTTTATCCCAGTGCTTTTGAGCTTAATTTTCACATTGGTATCGTGATAGCATTTGCATTCCTGCTTTTAAGCCTTATGGGGTCTCTCCTGGTGATCACTTGGTGCAGATTCCGAGTTCCTAGGTTTTGGGGATTCTGTCTTGTTGGTCTCTATATTGCTTTTATGGCCGTGAGCGTGGTAGTAGCCATGTTTTGA 1620 0.463 MAQRGNGMAFTLPSFKTSSLSFSLVFIVLFFLLNPPSPSPTPSTHRSLLFTSNSTACSSARSHSNGLINYFAIHHCLFHQNSFHSIPFLFLFLLLHFYILIKTAQDHFSVVTTKLALHLNLSPSMGAVTLLALGNGAPDVFASVAALRGGQYRTGLGAILSAGTFVSAFVVGFVAIYAAPFSVDPAPFVRDVLFYLISALFLFYVYLSAEIFLWQAIGFVGFYLFFVGFVFYMDLGMGSRREKSGNVRSFVGDLEGQKEPITAGYDIKVSGIEERKHSSRFRRGFEMILVIWERPVSLLLKLTIPQSGPSEWSRFYASANIALCPLAILYGCNSLMPFSYPIVFLLPNTHFPLWLVVLMTSCSLALLHFIMEKEPPKSEEIPVVLMAFVMSVFWISTVAGELLNCLAALGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVMQTAKVYPSAFELNFHIGIVIAFAFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYIAFMAVSVVVAMF 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0154 539 Pfam Sodium/calcium exchanger protein 385 534 IPR004837 GO:0016020|GO:0055085
Dere02g0154 539 Pfam Sodium/calcium exchanger protein 91 231 IPR004837 GO:0016020|GO:0055085
Dere02g0154 539 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 283 538 - -
Dere02g0154 539 Gene3D - 121 252 IPR044880 -
Dere02g0154 539 Gene3D - 317 536 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0154 Dere-ChrDere02 1439409 1442976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0154 17 537 Antiporters AT1G08960 69.216 0.0 671