Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0140 ATGGACAAGTTTACTTTGAGATTAGATGATATTTTTATTTCACTTGGAACAGGATGGATCATCAAGTTCATAGCCAGAACCAATCTATGGGGTTTTGTTAGTAGTGGAGCTCAAATGCCTTATGCTTCTAACCCATCCCAGCCGAACCAAATAACTGCAACAACGGGATCCGCTGTTATATCAGTTGGGACCATTCAATACAGTGGTCAGCCTGCTAGAGCTCAAATGGGACAGCACCAACTTGCTTATCAGCATATTCACCAACAACAACAGCAGCAACTTCACCTTCCCTTGGCAAGGATCAAGAAGATAATGAAGGCTGATGACAATGTTCGAATGATATCAGCTGAGGCGCCAAACAAAAGGAGAACACTTCAGAAGAATGATATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTGCCCCGTCTTTCTGGCCTGCAGATTGCTGGTGCACTGCTATGA 483 0.4327 MDKFTLRLDDIFISLGTGWIIKFIARTNLWGFVSSGAQMPYASNPSQPNQITATTGSAVISVGTIQYSGQPARAQMGQHQLAYQHIHQQQQQQLHLPLARIKKIMKADDNVRMISAEAPNKRRTLQKNDIAAAITRTDIFDFLVDIVPRLSGLQIAGALL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0140 160 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 74 119 - -
Dere02g0140 160 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 95 119 IPR003958 -
Dere02g0140 160 Gene3D Histone, subunit A 120 150 IPR009072 GO:0046982
Dere02g0140 160 Gene3D Histone, subunit A 64 119 IPR009072 GO:0046982
Dere02g0140 160 SUPERFAMILY Histone-fold 46 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0140 Dere-ChrDere02 1334954 1335580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0140 39 149 CCAAT-HAP5 Transcription Factor Family AT1G54830 48.201 3.02e-26 97.4