Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0125 ATGCAAGACATTTTTGGATCAGTTCGCCGATCACTGGTATTTCGTAGTTCGCCGGAGAACGAAGAAGCCTCACCAGGAGCAACCCTAGTTGATAAAATCAATTCTTGCATCCGCAAGTCAGTCTTCTCTAAACCCTTGCCGGCGTCACCGCCATTGCCACCCATTCCTAAGGACTCTGCGCCAGTGATCCGATGGCGCAAGGGCGAGTTGATCGGATTCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTGAAACAGGTTTTGATTGCAGCAAGCAGTGCTTCAAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACCGTTAGAGAGGAAGACACTTTAAATATTCTTCTGGAGTTTGTACCTGGTGGATCCATATCATCACTGTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTCATTAGATCTTATACGAATCAATTACTGTGGGGACTTGAGTACTTACACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTCGTTGATAACAAAGGTTGCATAAAGCTTGCAGATTTTGGGGCATCCAAACAAGTCGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCCATGAAGGGCACTCCATATTGGATGGCTCCCGAAGTTATTCTCCAGACTGGCCATAGCTTTTCTGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAGATGGCCACCGGAAAGCCTCCTTGGAGCCAGCAGTACCAAGAGGTTGCTGCTCTCTTCCATATAGGGTCAACAAAGTCTCATCCACCAATCCCTGATCATCTCTCCGTTGCAGCAAAAGATTTCTTGTTAAAATGTTTGCAGAAGGAACCAATTTTGAGGTCATCAGCATCAGAACTGCTGCAGCATCCCTTTGTTACTGGTGAACACATGGGTTCATTTCCCCTGTCGTGTGCTGCAATGGAAAATTTTGAAGCTCCTTCATCATCTTGTGCCCCAAATGTCAAAACTGTTTCAACTGTACATCCTGAGGAAACAGAAAATAAAGAGTTTTGGGGAATGAGCAATGATGATGACATGTGTGAGATTGATGACAAAGATGAGTTCTCTGAAGGAGATGTCAAGCTTAGATCTTCTATGTCAGTAAATATTAAGAGTTTCAACCCAGTGTCCGATCCCTCTGACGATTGGGATTGCAGAGTTGTGAGTCCAGAACTGGACCATAGTGGAGTTAGTATTAATAGTGATGAAATGTACATGCCTTCTTGCCACCCAGGGGCTCTCTACGAGGAGCAGAAAGATTTTTCCTTTTCAGGCGAACCATCAGTGTCTGAGGAGGATGATGAGCTCACGGAGTCTAAAATACAAGCTTTTCTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTATAACAGTTTAAATACATCTTGTTCTCCCAATGTGGTTGAAAGCACATGCGATGAAAATGCTCCAAAGTTCTTGAAATTACCTCCTAAAAGCAGGTCACCAAATCGAGTGCCAATTGGCACTCCATCTAAAGCAGTTGACAATTCTGAAAGTCCTGGAAGTAATGGCAGGTCCTCACCAAATGTTGGAAGTGCAAATGATCATAATTCACAGAACATACCACCACCGCCCCTCAATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGTCTTGTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAATGGAAAGAAGAGCTTGACCAGGAGCTTGAGAGAAAGCGCGAGATGATGCGTCAAGCTGGCATAGGAGGAAAAACATCATCACCAAAGGATCGAGCCTTAAATTGGCAGAGAGAGCGGACAAGATTTGCATCACCGAGCAAATAG 1953 0.4465 MQDIFGSVRRSLVFRSSPENEEASPGATLVDKINSCIRKSVFSKPLPASPPLPPIPKDSAPVIRWRKGELIGFGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRSYTNQLLWGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGSTKSHPPIPDHLSVAAKDFLLKCLQKEPILRSSASELLQHPFVTGEHMGSFPLSCAAMENFEAPSSSCAPNVKTVSTVHPEETENKEFWGMSNDDDMCEIDDKDEFSEGDVKLRSSMSVNIKSFNPVSDPSDDWDCRVVSPELDHSGVSINSDEMYMPSCHPGALYEEQKDFSFSGEPSVSEEDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPNVVESTCDENAPKFLKLPPKSRSPNRVPIGTPSKAVDNSESPGSNGRSSPNVGSANDHNSQNIPPPPLNEWKGLLVDSQQESCSPSLSFSERQRKWKEELDQELERKREMMRQAGIGGKTSSPKDRALNWQRERTRFASPSK 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0125 650 MobiDBLite consensus disorder prediction 521 602 - -
Dere02g0125 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Dere02g0125 650 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 50 334 - -
Dere02g0125 650 SMART serkin_6 65 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0125 650 FunFam Serine/threonine-protein kinase STE11 61 155 - -
Dere02g0125 650 MobiDBLite consensus disorder prediction 614 650 - -
Dere02g0125 650 MobiDBLite consensus disorder prediction 583 598 - -
Dere02g0125 650 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Dere02g0125 650 SUPERFAMILY Protein kinase-like (PK-like) 64 328 IPR011009 -
Dere02g0125 650 Coils Coil 601 621 - -
Dere02g0125 650 Gene3D Transferase(Phosphotransferase) domain 1 64 363 - -
Dere02g0125 650 CDD STKc_MAPKKK 64 327 - -
Dere02g0125 650 MobiDBLite consensus disorder prediction 534 574 - -
Dere02g0125 650 Coils Coil 98 125 - -
Dere02g0125 650 FunFam Mitogen-activated protein kinase kinase kinase 2 64 355 - -
Dere02g0125 650 ProSiteProfiles Protein kinase domain profile. 65 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0125 650 Pfam Protein kinase domain 66 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0125 Dere-ChrDere02 1228322 1233048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0125 1 650 MAP Kinase Kinase Kinase AT1G54960 57.676 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere02g0125 Pkinase 9.9e-71 CL0016