Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0118 ATGTTAACGCTCTCTGAAGTCGACTCAGCTAGAAATCTGAGCTGTTGTGACCAGCCATGCTGGCTTACGTACTATAGATTATTCGATGATGTGAAGCTCGAAATAGATAAAGAATTAATGGCACCAACAAGGAAATCCAGAAGTCTGAATAAGCGGTTTTCAAGTTTAAACGAGGCCTCTCCTGATAAAGATGAAATCAACTCAAACAAAAATAAGCATCGGAAGAAAAAGTTGTCTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTGGAGCGTTTTTATGAAGCGTACAGGAAGTATGGGAAAGACTGGAAGAAGGTGTCTGCTTCTGTACGGAATAGATCCACTGAAATGGTGGAGGCTCTTTACAATATGAATCGGGCATATTTATCTCTTCCAGAAGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGATCATTATAATGTGCTGGAAGGTAGTGATAGTGAAAGGGAGAGTAGTGATGCACCAGGATCTCAAAAACCTTTGAAACGGAAACGTGGGAAAGTTCAGCTTAGTTTCTCAAAAGATTCTGTTCAGAGTCAGTCAGTTGCTTCTAATGATGGTTGTCTCTCTTTATTGAAGAGAAGACACTTTGATGGTATCCAGCCCCGTGCAGTTGGAAAAAGGACACCCCGCATCCCAGTTTCCCATTCTCATAAAAAATTTGATAGGGAAAAATTTGTTTCACCTATTAAAAGAAGCCTGAAGTCAGAGGGTAATGCTAATGATGATGAAGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGAGGGTCTCCCCATATTTCTCAAACTCAATACAGAAGAGCAGAGCAGAAATCCTCTCCTGTTCAAAGCTGGGAAAGAATGTCCAAGACAGCCCGTGCCAAGTTTCATGAAGCTTCTGTGGATGAAGAGTGCTTGGAAGGTAGTATAGAAAGTGCGGGAGCTGAAAATGGAGAATATGCTAGAGATACTAGTTCATTGATGGGCATGGAAGGTGTTGGCACAGTTGAAGTACATCAGAAGGGAAAGAAAGTTTACAGAAAGAAAGAGAGAATGGAAAATGTTAGAAACCATCAGCTTGATGATGGTGGGGAAGCATGTAGTGGCACTGAAGAAGGACTTTATTTTAATTCTTTGAAGGAAAACGTTGATATTGAAGTTACTAATGCCAAACCTGAGCAATTCTCTCCTAAAAGTCGGAGGAAAAGAAGCAAGAAACTTTTTTTCGGAGATGAAAGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGACCTTTCTCTGATGATGCCCGTGTCTACAATGGAATCTGAATCATCTGTCCAGTTGAAGGAAGAAAGAATGACTGTTGAGAAAGATGATAAGTCTGCTTTACCTGAAGGTACATTTACAAGCCAAAACAGAGACAAAATCAAACACCCAGGCTTGAAACAAAAGGTTCCTCATGCAGTCCCTGGAATTGAGGCTTCAACCTCCAGAAAATCTAAACTTGGACGGGAGTTGGAAAATGATACAAATGCTTCTGCTGAATCAAAAGAACAGATTCTACCTGCTGATAGAACATGGAAAAGAAAGCGCAAGTCTGTGGTCTCAAAGGTTGTTGTTGATGAAGAGGATAAACCAATGATTAAAGGAAAACACACTGGTCAGCCTTTCACTCTACCAAAGCAATTGAAGTCAGTCCGATCATCAGAGAGTTCCTTGTGTAGTGATCCTAAAGATTTAACTGTATCAACGGCAGAAGTTCCACTTGCATGTGAAGTTAGTTTTCCAAATAAACAAAGAAATAGACGAAAAATGAATCTACAAAGAACATTTATGCTGAAAGAGAAATCTTCTGAGAACATATTGAAAAGTCAATCTAGTAAATACTCGTCTGGCCTTCAAGACAGGGCTTCAAATTTGAAGGAAAAGCTTTCTGGTTGCTTGTCATCATGTATGGTTCGCAGATGGTGTATCTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAGTTCATGGAGTATTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTTATTAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAGCATTTTCTATGTGAAGAAAGACAAAAACTTGAACAGTATAGGGAATCTGTGAGGAAACATTACACTGAACTGCGCACTGGCGTCAGGGATGGACTTCCAACAGATTTAGCAAGACCTTTGTTTGTGGGACAACGAGTAATTGCTATTCACCCAAAATCAAGAGAGGTTCATGATGGGAGTGTGCTTACTGTTGACCATGACAAGTGCAGGGTTCAGTTTGACCGGCCTGAATTAGGGGTTGAATTAGTCATGGACATTGATTGCATGCCAATGAATCCATTGGATAATATGCCAGAAGCTCTGAGAAGACAGATTGGTGCTGGCAATGTTTCTTGTATGAGCAAACATCTACAGATTAATGAAATTTCTAATATTGGGGGTTGTGTGACATGTGCTTCAGGTGGACCCCTGGAGAAGGTACCCACCCCTTCAAGTACTTTGGTGAAGCAGGGAAAGGGGGATGTTAATCATGCCATTATCCAAGAAAAGGTTGGTACCATTGATAACATTGATACAACACGAGAAGCATATGCTCAACCTTGTACATTCACACCTCAACAAGCTAGAGAAGCTGATATACGTGCCCTTTCTGAACTGACTCGAGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATAATGACATATTGGAAAACCAAAATGACATAGACTGCTTTAAAGATTCAGAGTCTTTCAAAAAGCATTACGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGGGCAGGTTTCTTCTGCCCTGCTTAATCTGAGGCAACGAAATACTTACACAGGAAATTCTCCACCTCCATGGGTGAAGCCCCAAGCAAGTTTCAAAGTTCACGACGAATTTCCCTGTACAATAGATAGTTCTCTATTACAAGAGTTAGGGTCAACTGTTATTGAAATTATCAAAGGATCCAGGTTAAGAGCTCATGCCATGGTGGATGCTGCAATTCAGACGTTGTCTTCGACAAAAGAAGGTGAAGATGCTTTCGTGAGGATAGGGCAGGTATTGGACTCGATTGATTATCAGCAGTTAGCCTCCAACTTTAGGTTACCTTTAAATAGGTCCCAAGAGCAAGTGAATGGCAGTTTTGGTCCGCATGATCAGTCAATTTGCTGTGGAGCAGAACCTTTACATAGTGATCCATCTGGTTCGAAATTGCTTAATGATTCTCACAAAGTTGATACTCAAATTCCTTCCGAGCTCATCACATCCTGTGTTGCCACTTTGATCAAGATTCAGACTTGTACTGAACGGCAATACCCCCCAGCTGATGTGGCTCAGATATTGGATTCTGCTGTTAACAGCCTACATCCATGCTGTCCTCAAAACCTTCCTATATACAGAGAAATTAAAATGTGCATGGGAAGAATCAAGACCCAGATTTTAGGTCTCATCCCAACTTGA 3570 0.4118 MLTLSEVDSARNLSCCDQPCWLTYYRLFDDVKLEIDKELMAPTRKSRSLNKRFSSLNEASPDKDEINSNKNKHRKKKLSDKLGSQWSKEELERFYEAYRKYGKDWKKVSASVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESSDAPGSQKPLKRKRGKVQLSFSKDSVQSQSVASNDGCLSLLKRRHFDGIQPRAVGKRTPRIPVSHSHKKFDREKFVSPIKRSLKSEGNANDDEVAHVAALALTEAAQRGGSPHISQTQYRRAEQKSSPVQSWERMSKTARAKFHEASVDEECLEGSIESAGAENGEYARDTSSLMGMEGVGTVEVHQKGKKVYRKKERMENVRNHQLDDGGEACSGTEEGLYFNSLKENVDIEVTNAKPEQFSPKSRRKRSKKLFFGDESSALDALQTLADLSLMMPVSTMESESSVQLKEERMTVEKDDKSALPEGTFTSQNRDKIKHPGLKQKVPHAVPGIEASTSRKSKLGRELENDTNASAESKEQILPADRTWKRKRKSVVSKVVVDEEDKPMIKGKHTGQPFTLPKQLKSVRSSESSLCSDPKDLTVSTAEVPLACEVSFPNKQRNRRKMNLQRTFMLKEKSSENILKSQSSKYSSGLQDRASNLKEKLSGCLSSCMVRRWCIFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERQKLEQYRESVRKHYTELRTGVRDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVELVMDIDCMPMNPLDNMPEALRRQIGAGNVSCMSKHLQINEISNIGGCVTCASGGPLEKVPTPSSTLVKQGKGDVNHAIIQEKVGTIDNIDTTREAYAQPCTFTPQQAREADIRALSELTRALDKKEKLLMELRNANNDILENQNDIDCFKDSESFKKHYATVLVQLKEASGQVSSALLNLRQRNTYTGNSPPPWVKPQASFKVHDEFPCTIDSSLLQELGSTVIEIIKGSRLRAHAMVDAAIQTLSSTKEGEDAFVRIGQVLDSIDYQQLASNFRLPLNRSQEQVNGSFGPHDQSICCGAEPLHSDPSGSKLLNDSHKVDTQIPSELITSCVATLIKIQTCTERQYPPADVAQILDSAVNSLHPCCPQNLPIYREIKMCMGRIKTQILGLIPT 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0118 1189 SMART DIRP_2 666 767 IPR033471 -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 272 297 - -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 57 71 - -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 156 188 - -
Dere02g0118 1189 Gene3D - 7 138 - -
Dere02g0118 1189 PANTHER LIN-9 40 1189 IPR010561 GO:0006351|GO:0017053
Dere02g0118 1189 MobiDBLite consensus disorder prediction 446 478 - -
Dere02g0118 1189 SUPERFAMILY Homeodomain-like 80 129 IPR009057 -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 502 516 - -
Dere02g0118 1189 Pfam Myb-like DNA-binding domain 84 121 IPR001005 -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 156 172 - -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 449 467 - -
Dere02g0118 1189 SMART sant 82 130 IPR001005 -
Dere02g0118 1189 Pfam DIRP 665 766 IPR033471 -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 300 314 - -
Dere02g0118 1189 Coils Coil 911 941 - -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 213 232 - -
Dere02g0118 1189 FunFam Protein ALWAYS EARLY 3 isoform A 42 138 - -
Dere02g0118 1189 ProSiteProfiles Myb-like domain profile. 84 125 IPR001005 -
Dere02g0118 1189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 120 IPR017930 -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 51 82 - -
Dere02g0118 1189 ProSiteProfiles SANT domain profile. 81 118 IPR017884 -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 496 528 - -
Dere02g0118 1189 MobiDBLite consensus disorder prediction 269 326 - -
Dere02g0118 1189 CDD SANT 86 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0118 Dere-ChrDere02 1182428 1194270 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere02g0118 DIRP 1.5e-31 No_clan