Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0087 ATGATGATGATGACCATGGAGGGTATGATGGACAAGAGCGTTCTCGATGATGTTATTCGGAGGCTGCTCGAAGGCAAAGGCGGAAAACAGGTCCAGCTTTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCCGCCAAATCTTCCTTTCCGAGCCTAATCTCCTCGAGCTCCATGCTCCTATCCGCATATGTGGTGATATACATGGACAGTACCAAGACTTACTGAGGCTATTCGAATATGGTGGTTTCCCTCCTGCTGCTAACTACTTGTTTCTGGGGGACTACGTAGACAGAGGGAAGCAAAGTTTGGAGACTATATGTTTACTTTTGGCCTACAAGATAAGATATCCTGACAAAATTCACCTCTTGAGAGGGAACCATGAAGATGCAAAGATAAACCGGATATATGGGTTTTACGATGAATGTAAAAGGAGATTCAATGTAAGGCTATGGAAGATATTTACTGACTGCTTTAACTGCTTGCCGGTCGCTGCACTCATTGATAATAAAATACTTTGTATGCACGGCGGCCTCTCTCCAGAATTACAGACTTTGGATCAGATAAAGGAGATTACAAGGCCTACAGAAATTCCTGATAATGGTCTCCTCTGTGATCTGCTTTGGGCTGATCCTGATGCCAGTGTTGAGGGCTGGGCAGAGAGTGACCGGGGTGTTTCATGTACTTTTGGGCCTAATGCACTCAAAGAGTTTTTGGATAAAAATGACCTTGATCTAATTTGCCGAGGTCATCAGGTGGTGGAGGATGGATATGAGTTTTTTGCTAAGCGGAGGTTAGTCACCATATTTTCTGCTCCAAACTATGGTGGGGAGTTTGATAATGCTGGTGCATTGTTGAGCGTTGATGAATCTCTCGTGTGTTCCTTCGAGATATTGAAACCGATTGACAGAGGATCAGGAAGTGGTTCTAAATTGAATCTTAAGAAGCCCCCTAAAAAGATCTAA 966 0.4441 MMMMTMEGMMDKSVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSEPNLLELHAPIRICGDIHGQYQDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDNKILCMHGGLSPELQTLDQIKEITRPTEIPDNGLLCDLLWADPDASVEGWAESDRGVSCTFGPNALKEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPIDRGSGSGSKLNLKKPPKKI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Dere02g0087 321 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Dere02g0087 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Dere02g0087 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 19 306 - -
Dere02g0087 321 Gene3D - 7 307 IPR029052 -
Dere02g0087 321 CDD MPP_PP1_PPKL 14 301 - -
Dere02g0087 321 FunFam Serine/threonine-protein phosphatase 6 310 - -
Dere02g0087 321 SMART pp2a_7 33 303 IPR006186 GO:0016787
Dere02g0087 321 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Dere02g0087 321 SUPERFAMILY Metallo-dependent phosphatases 10 303 IPR029052 -
Dere02g0087 321 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0087 Dere-ChrDere02 888911 891360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0087 40 246 Calmodulin-binding Proteins AT5G63870 31.174 5.05e-32 119