Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0085 ATGTCAAGAAGACGTCTAAATATGTTTCTGGATTGCCTCTTCAATTGCAGGTGTGGGAACGCGAAGGCAGAGGGAGGTAGCTCGTCAGGACCCGAAGCTGCAATGGGGATCGATCTTAAAGCTGGTGGTAAGAGCAAGAAGACCAAAAGAACAGCACCCAAGTCCAATGATATCTACCTCAAGCTCCTCGTCAAGCTTTACCGCTTTCTAGTCCGGAGAACTGGAAGCAATTTCAATGCTGTAATACTGAAGCGCCTCTTTATGAGCAAAGTTAACAAGGCCCCTCTTTCTTTGTCAAGGTTGATAAAGTTTATGAAGGGGAAGGGAGATAAGATTGCTGTGTTGGTGGGGACTGTGACTGATGATATACGAGTGTACGAAGTTCCACCCTTGAAAGTTACAGCACTCCGGTTTACTGAGACAGCACGTGCAAGAATAGAAAAGGCTGGTGGTGAGTGCTTGACATTTGATCAGCTCGCTCTTAGGGCCCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCCAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCACACCAAGCCTTACGTGCAATCCAAGGGCAGAAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGGGTTTAA 666 0.4865 MSRRRLNMFLDCLFNCRCGNAKAEGGSSSGPEAAMGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKAPLSLSRLIKFMKGKGDKIAVLVGTVTDDIRVYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVQSKGRKFERARGRRNSRGFRV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0085 221 FunFam 60S ribosomal protein L18 35 221 - -
Dere02g0085 221 PANTHER 60S RIBOSOMAL PROTEIN L18 35 221 IPR000039 GO:0003735|GO:0005840|GO:0006412
Dere02g0085 221 SUPERFAMILY Ribosomal proteins L15p and L18e 54 173 IPR036227 -
Dere02g0085 221 Pfam Ribosomal protein 60S L18 and 50S L18e 36 221 IPR021131 -
Dere02g0085 221 Gene3D - 35 221 - -
Dere02g0085 221 MobiDBLite consensus disorder prediction 185 221 - -
Dere02g0085 221 MobiDBLite consensus disorder prediction 207 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0085 Dere-ChrDere02 881303 883955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0085 37 221 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 2.12e-103 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0085 02 881303 883955 Dere02g0085 02 881303 883955 CCT
Dere02g0085 02 881303 883955 Dere02g0085 02 881303 883955 ECH