Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0070 ATGTTGGTTATGATGCAGGAAACGTCATGGCATGAAGCGAGCGAGTACAAGAAATGCTGTACTGATTGCAAAACCACTAAAACCCCACTCTGGAGAGGAGGACCAGCTGGGCCCAAGACCCTGTGCAACGCTTGCGGGATTAGATACACAAAGAGAAGGTCCTGTGCGATGGGATTGAACAAAGGACAAGACAGGAAAAGAGACAGAGCTCAAATTGTTGGTATTAATGGCAATCATTTGAATGAGTCTGTGAGAATGAACATGATGGGATTGGGTGAGGAGGTTTTGGTGCCGCGGGTACCTTCGATTTTGAAGAGACAAAGATGCCAGAGGAAGAGAAAGTTAGGGGAAGTGGAACAAGCCGCTTTCTGTTTGATGACACTATCCTGCGGCTTTCGAAGCACTAGGGAGATCCAGAATTTTAAAATAACCCCAATCAACATGCCCTTTTTGGTGTCATATAGCTAA 468 0.4573 MLVMMQETSWHEASEYKKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYTKRRSCAMGLNKGQDRKRDRAQIVGINGNHLNESVRMNMMGLGEEVLVPRVPSILKRQRCQRKRKLGEVEQAAFCLMTLSCGFRSTREIQNFKITPINMPFLVSYS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0070 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 53 - -
Dere02g0070 155 ProSiteProfiles GATA-type zinc finger domain profile. 20 49 IPR000679 GO:0006355|GO:0043565
Dere02g0070 155 Pfam GATA zinc finger 20 54 IPR000679 GO:0006355|GO:0043565
Dere02g0070 155 CDD ZnF_GATA 20 69 IPR000679 GO:0006355|GO:0043565
Dere02g0070 155 PANTHER OS01G0976800 PROTEIN 7 131 - -
Dere02g0070 155 SMART GATA_3 14 66 IPR000679 GO:0006355|GO:0043565
Dere02g0070 155 Gene3D - 15 74 IPR013088 GO:0006355|GO:0008270
Dere02g0070 155 ProSitePatterns GATA-type zinc finger domain. 20 45 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0070 Dere-ChrDere02 762945 764190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0070 14 129 C2C2-Gata Transcription Factor Family AT3G06740 47.009 8.82e-26 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dere02g0070 GATA 2.3e-15 CL0167