Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0068 ATGGGCGACATTGCAAAGAAGTCGTGGGATACAATTATTGAACATGCCGCCAAGGCTTGTGATGCAGACGATGGTATGCGTTACATTTACCAGTATCCCACAGCAGAACAACCAATAGTTCTTCTCTTCAATTCCGTCTATAAGCTTGTGGATGTGAGTTTTGATGGGCATACCTATCGTTCTTTAGAATCTCTGAACTCGGAAGAGGAGCGCCTGGTGGAAAGAGCTAAGCAGAATGCTTACCAAAATTTGAAAGATTTGATCCCAGTGGAGACATCGACATATGGCTTGGGGCAGACAATAGCAGGCCAACCTTCCACCTCAATAATTCAAGATGACCAAGTAGGCATTGATCAAATGCCACTGAACAGTCCTGGGGTAGAGTTAGTGCCTGAAGTGTTCATTGATGAAGATGGATGGCACCTTAATGGAGCACAGATGCAGAGGCTGAAGCGCGTAAATCATAGATCGGTCTCTCTTTGTTTGGGTCAACCATGGCGGTCTCCGGCCGGCAGCGCAAGATCCTTGATTCAGCGGAATAGGTTGCATCCAGGAACTCTTGGAACTAAACCTAATCAAGAATCTTGTCTTGTGATTATGGCATTGAAAAGAAAAGCTAACGATTCTGAAATTCCAGTTGGAGAGCCAAAGCGAAGACACGAAGATACTAGACAAAAAGAGATCATTCTAGTAACGCCTTCTCAATATGGTGAAATTTCCGAAGCCAAACGCTACCAGTTGCGTTTCACTAATAAACTGAAAGAAGTATATTATGCACAGAATGAGATACTGGCCGAGGGCGATGCACCTGTTCAAATCGGTCTATTTGATGGTGGATCTCAGTCTATAGTGAGTGATGGTCCCATGTCTTCCGTGACGATAGAGATTTGTGTCCTCCCGGGTGAGTTTGGGAGTGACCGTTGGAATTGGACTAGGGAGGAATTCAACGCCAATATCTTACGACCAAGAGAAGGTAAAAAGGCACTACTGAAGGGAAAGACAAGCATTACTCTTAAAGATGGAGTTGGTTTGATTTCTGAGATCGAATTTACTGATAGCTCATGTTGGGTAAGAACCGGAAAGTTCAGATTAGCAGTGAAATCCAACGAGGCAAACATTAAGGAAGCTGCAACTTTTAAGAAATCCGACCAACCATCCTTGGCTGATGATATATGGCGCCTGAGGAACATAGGGAAAGGCGGAAAAATTCACGGGCTGCTGTCAAACAATGGAATAGAAAAGGTTAAGGATTTGATGCGGCTTTACACAACCAATCCATCTTTATTAAAAGAGATATTTGGCGGCATTTCGCGCAGAAGAAGGGAGAGTATTATTAAGCATGCTAAAGCTTGTGTCATTGATGATAATGAGCGTTACTGCTATTATGCAGCAGAAAGTCAAATATGCATGGTCTTCAATTCCATCTATGAGGTTGTGAAAGTGAGCTTCAGCGGGCAAAATTATCGTTCACCAGAAACTCTCAACCCCATTGAGAAGCAACGGGTAGAAGTAGTTAAGCAGCAAGCTTATCAAAATGAGAAGGATTTCATCCCAGTCCCAGGGGATTTGGCGGCCTTGGGAAATCTACCAGTTGGGCAGTTCAGTGGTACTCAAAATTATACAGTTCCACCGCAGTTTGACCTCCTACCTGCTCAACAGTGGCAAGAGTTTGACCTGGCGCTCCTCAGTGGTTGTGGATCACAGACTCCACTTTCCTTTTCATTTCCATTTCCATCCGATTTTCCTTCCACCTCACTGGGGCAACCGATTGTCTTCCCCTTTGAAGGAGAGTGTAGCAATCCTTTTCAGTCTCTCCACAATTCTGATGCGACTATGCCAAGCTACGGGACACGCAAAAAAGTGTGGAATAAGATACGGGCGGCTCTCAAATGGGTCATATTACGTAAATCACTGTGCCGCTATTCTGCTTCTCTTCTATTGGACCTTATTTGCACTTCGTTTCTTGAGCGGCTGGGCGTTGTCTGGTTCTGTCCTTCGATGGATCGGGAAGGAGGATCCAACGACGGATCTTGCTACTACGCCGTCCTGGGAATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTATCGAAATCTCGCTCTGAAGTGGCACCCGGACAGATGGGCTCGGAACCCTGCAATAGCTGTAGAAGCCAAACGGCGGTTTCAGCAGATTCAAGAAGCTTACTCAGTTCTTTCCGATCAGTCTAAAAGGTCAATGTACGATGCCGGTCTCTACGATCCCTTAGAAGAAGTAGACGAAGGATTCTGTGATTTCATGCAAGAAATGATCTCAATGATGAACAACGTGAAAGACGAGGGGGACAGTTTGGAAGATCTACAAAGGATGTTCGTAGAATTGGTTGGTGGAGATGGGATAAGCTTTGAGTTGAAGGATGATCAAACAAGCGGCAAGAGAGGTCGTGCGAATGCAGCAAGAGGCAACGCAGCTAAGCGCAGCAACGCTCGTCGCTAG 2481 0.4559 MGDIAKKSWDTIIEHAAKACDADDGMRYIYQYPTAEQPIVLLFNSVYKLVDVSFDGHTYRSLESLNSEEERLVERAKQNAYQNLKDLIPVETSTYGLGQTIAGQPSTSIIQDDQVGIDQMPLNSPGVELVPEVFIDEDGWHLNGAQMQRLKRVNHRSVSLCLGQPWRSPAGSARSLIQRNRLHPGTLGTKPNQESCLVIMALKRKANDSEIPVGEPKRRHEDTRQKEIILVTPSQYGEISEAKRYQLRFTNKLKEVYYAQNEILAEGDAPVQIGLFDGGSQSIVSDGPMSSVTIEICVLPGEFGSDRWNWTREEFNANILRPREGKKALLKGKTSITLKDGVGLISEIEFTDSSCWVRTGKFRLAVKSNEANIKEAATFKKSDQPSLADDIWRLRNIGKGGKIHGLLSNNGIEKVKDLMRLYTTNPSLLKEIFGGISRRRRESIIKHAKACVIDDNERYCYYAAESQICMVFNSIYEVVKVSFSGQNYRSPETLNPIEKQRVEVVKQQAYQNEKDFIPVPGDLAALGNLPVGQFSGTQNYTVPPQFDLLPAQQWQEFDLALLSGCGSQTPLSFSFPFPSDFPSTSLGQPIVFPFEGECSNPFQSLHNSDATMPSYGTRKKVWNKIRAALKWVILRKSLCRYSASLLLDLICTSFLERLGVVWFCPSMDREGGSNDGSCYYAVLGIRRDASFSDIRTAYRNLALKWHPDRWARNPAIAVEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEVDEGFCDFMQEMISMMNNVKDEGDSLEDLQRMFVELVGGDGISFELKDDQTSGKRGRANAARGNAAKRSNARR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0068 826 Gene3D DnaJ domain 666 760 IPR036869 -
Dere02g0068 826 ProSitePatterns Nt-dnaJ domain signature. 724 743 IPR018253 -
Dere02g0068 826 Pfam DnaJ domain 679 744 IPR001623 -
Dere02g0068 826 PRINTS DnaJ domain signature 680 698 IPR001623 -
Dere02g0068 826 PRINTS DnaJ domain signature 698 713 IPR001623 -
Dere02g0068 826 PRINTS DnaJ domain signature 719 739 IPR001623 -
Dere02g0068 826 SMART dnaj_3 677 739 IPR001623 -
Dere02g0068 826 ProSiteProfiles dnaJ domain profile. 678 747 IPR001623 -
Dere02g0068 826 Pfam Calmodulin binding protein-like N-terminal domain 245 378 IPR046831 -
Dere02g0068 826 Pfam Calmodulin binding protein C-terminal domain 28 89 IPR046829 -
Dere02g0068 826 Pfam Calmodulin binding protein C-terminal domain 458 516 IPR046829 -
Dere02g0068 826 Pfam Calmodulin binding protein central domain 387 451 IPR046830 -
Dere02g0068 826 SUPERFAMILY Chaperone J-domain 675 748 IPR036869 -
Dere02g0068 826 Coils Coil 59 79 - -
Dere02g0068 826 PANTHER OS02G0177800 PROTEIN 4 104 IPR012416 GO:0005516
Dere02g0068 826 MobiDBLite consensus disorder prediction 800 826 - -
Dere02g0068 826 CDD DnaJ 678 736 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0068 Dere-ChrDere02 728295 737023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0068 240 512 Calmodulin-binding Proteins AT5G26920 37.282 4.99e-49 177