Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0049 ATGGGTCATGAGGGAGAGACTGTGGTTGAGAAAGTGTGCGAGCTTTATGACCAAATTTCAAGGCTTGAGAGTCTCAAGCCCTGCAAGAATGTGGACTCCCTCTTCACCCAACTCGTCCGCACATGCACCCCACCTGTCTCCATCGACGTCGACAAGCTCCCCAAAACGGTGCAAGAGAAGCGATCCAAACTTATTGGAATCTGCGGCAAAGCGGAGCAACAACTGGAGATTCACTACTCATCCATCCTAGGCTCCTTCGCCAACCCACTTCATCATCTCACCATCTTCCCTTACTACAACAACTACCGCAAGCTTTGCCACCTCGAGTACAACCTCATCTCCCAGCAATCTCCTCATGCCCCTACCAAGATTGCCTATGTGGGCTCTGGCCCTCTTCCTCTCACTTCCATCGTATTGGCCTCCCACCACATGCCCAACACCACCTTCCACAACTATGACCCCGACCCTGTTGCCACGTCCATGGCTCAGCGCTTGATTTCCCCCGATCCTGATCTCTCAAAGCGTATGTTCTTTCACAACAAAAATATATTGGATGAGTCAGAGGGCTTGAAGGAGTACGATGCTGTTTTCGTGGCGGCTCTGGTGGGGTTAAACAGAGAGGAAAAGAATCAAATCATGGCTCATTTGGCTAAGTACATGGCTCCTGATGCGCTTCTGATGATGAGGAGTTCAAACGGGGCTCGGGTTTTCCTGTACCCAGTTATTGACCCGCGTGATCTTGCAGGCTTCAAGGTGCTCACTGTCTTCCATCCCACCGATGATGTTATCAATTCGGTAGTCCTTGCACGGAAATATGCTAATGGGGAAGAACAATTACTCTAA 843 0.503 MGHEGETVVEKVCELYDQISRLESLKPCKNVDSLFTQLVRTCTPPVSIDVDKLPKTVQEKRSKLIGICGKAEQQLEIHYSSILGSFANPLHHLTIFPYYNNYRKLCHLEYNLISQQSPHAPTKIAYVGSGPLPLTSIVLASHHMPNTTFHNYDPDPVATSMAQRLISPDPDLSKRMFFHNKNILDESEGLKEYDAVFVAALVGLNREEKNQIMAHLAKYMAPDALLMMRSSNGARVFLYPVIDPRDLAGFKVLTVFHPTDDVINSVVLARKYANGEEQLL 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0049 280 PANTHER NICOTIANAMINE SYNTHASE 3 4 273 IPR004298 GO:0030410|GO:0030418
Dere02g0049 280 Pfam Nicotianamine synthase protein 5 274 IPR004298 GO:0030410|GO:0030418
Dere02g0049 280 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Dere02g0049 280 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Dere02g0049 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 234 IPR029063 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g0049 Dere-ChrDere02 578855 579697 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0049 1 273 Nicotianamine Synthase Gene Family AT5G04950 57.401 2.70e-116 335