Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0047 ATGCCCAACACCACCTTCCACAACTATGACCCCGACCCTGTTGCCACGTCCATGGCTCAGCGCTTGATTTCCCCCGATCCTGATCTCTCAAAACGCATGTTCTTTCACAACAAAAATATGTTGGATGAGTTAGAGGGCTTGAAGGAGTATGATGCTGTTTTCGTGGCGGCTCTGGTGGGGTTAAACAGAGAGGAAAAGAATCAAATCATGGCTCATTTGGCTAAGTACATGTCTCCTGATGCACTTCTGATGATGAGGAGTTCAAATGGGGCTCGGTTTTTCCTGTACCCGGTCACTGACCGGCGTGATCTTGCAGGCTTCAAGGTGCTCACTGTCTTCCATCCCATCGATGATGTTATCAATTTGGTAGTCATTGCATGTAAATATGGGAATGGGGAGGAGCAATTCCTCTAA 414 0.4758 MPNTTFHNYDPDPVATSMAQRLISPDPDLSKRMFFHNKNMLDELEGLKEYDAVFVAALVGLNREEKNQIMAHLAKYMSPDALLMMRSSNGARFFLYPVTDRRDLAGFKVLTVFHPIDDVINLVVIACKYGNGEEQFL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0047 137 PANTHER NICOTIANAMINE SYNTHASE 3 1 128 IPR004298 GO:0030410|GO:0030418
Dere02g0047 137 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 133 IPR004298 GO:0030410|GO:0030418
Dere02g0047 137 Gene3D Vaccinia Virus protein VP39 1 129 IPR029063 -
Dere02g0047 137 Pfam Nicotianamine synthase protein 1 130 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0047 Dere-ChrDere02 539360 539773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0047 1 130 Nicotianamine Synthase Gene Family AT5G04950 55.385 7.93e-50 159