Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g4010 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCACTTCCCACTTCACCGTCGGGTAATAGGAATCGAAAGAACTACAGAAAAAGATTGGGATCAAGGAGTTCTTCCTTTGACCGTTGGAGGGATGAACCCCTCCATAGAATTCCAGGCAGGCTGTTTCTGAATGGGTCTAGTGAAGTTGCATCCTTGTTCACTCAACAAGGCAAGAAAGGCACCAATCAAGACGCCATGATTGTTTGGGAGAATTTTTGTTCTAGAAAAGACACCATTTTTTGTGGAGTTTTTGATGGCCATGGTCCGTTTGGTCATATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAGTTCACATTGGGAACTTAATGGAACTGGTGAAGAAGTCCTCAAGGAGATTAGCATTAATACTACAGGAAGCATGAACTCAGAAGAGGCTGCCTTTGTATCTGCTGACGAGGAATCCAGGGCATCCCTTGAGTCTGAGGAAATGGATAAACACCCTGAGATCTTTCGAACACTTAAAGAGTCATTTTTAAAGGCATTTAAAGTTATGGACAGGGAACTGAAGATGCACCCAGGTATTGACTGCTTTTGCAGCGGGACTACAGCAGTAACTCTAGTTAAGCAGGGTCGAGACCTTGTTATTGGAAATGTTGGTGACTCTAGAGCTGTGCTAGGTACAAGAGACCGTAATGATTCTCTTGCAGCTGTCCAATTAACGGTTGATCTAAAACCCAGTCTTCCAGCGGAAGCAGAGAGAATTCGCAAATTTAAAGGGCGTGTTTTTGCTCTTCAGGATGAACCTGAGGTTGCCAGAGTCTGGTTGCCAAACAATGACTCTCCTGGTCTAGCCATGGCCCGGGCATTTGGAGATTTTTGTCTCAAAGATTTTGGTCTGATATCTGTTCCAGAAATATCCTACCGTTGCCTCACTGAGAAGGATGAATTTGTTGTCTTGGCAACAGATGGGATTTGGGATGTGCTCTCAAATAAAGAAGTGGTTGACATCATAGCAGCAGCCCCAGGGCGTTCCTCTGCAGCTAGAGCGCTGGTTGAGTCAGCAGTTCGAGCTTGGAGATATAAATACCCAACTTCTAAAGTGGATGATTGTGCCGTCGTTTGTCTCTTCCTTGACTCAGGCTCACCTAAGTTATCTACTGCCTCTCATATCAATTCCAAAGAGCAGCCTAGTACAGGAAACCAAGTCAATGATGGTGGGGAAGATCTTTCTGGACCAACTGTTCTTGAAAGGTCAGGAACTTGCCGCGCAAGCAATGAGAAGTCACAGGAAGAAAGCAATGAAGCAGCGTCAAAGGAGGAAGAGATAGATGCTGAGTTAGAAAAAGAGTGGTCTGCTCTTGAAGGAGTATCTCGTGTAAACACATTATTGAATCTCCCAAGATTTGTCCCTGGCGAAGAAGACAAGGCTGCGGGAGGGATGAGGAGACGCAAGTGA 1461 0.4559 MGSCFSAESRSPLPTSPSGNRNRKNYRKRLGSRSSSFDRWRDEPLHRIPGRLFLNGSSEVASLFTQQGKKGTNQDAMIVWENFCSRKDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLSSHWELNGTGEEVLKEISINTTGSMNSEEAAFVSADEESRASLESEEMDKHPEIFRTLKESFLKAFKVMDRELKMHPGIDCFCSGTTAVTLVKQGRDLVIGNVGDSRAVLGTRDRNDSLAAVQLTVDLKPSLPAEAERIRKFKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEISYRCLTEKDEFVVLATDGIWDVLSNKEVVDIIAAAPGRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSGSPKLSTASHINSKEQPSTGNQVNDGGEDLSGPTVLERSGTCRASNEKSQEESNEAASKEEEIDAELEKEWSALEGVSRVNTLLNLPRFVPGEEDKAAGGMRRRK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g4010 486 SMART PP2C_4 51 377 IPR001932 -
Dere01g4010 486 SUPERFAMILY PP2C-like 53 380 IPR036457 -
Dere01g4010 486 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Dere01g4010 486 MobiDBLite consensus disorder prediction 425 445 - -
Dere01g4010 486 Pfam Protein phosphatase 2C 171 357 IPR001932 -
Dere01g4010 486 MobiDBLite consensus disorder prediction 385 409 - -
Dere01g4010 486 FunFam probable protein phosphatase 2C 33 55 382 - -
Dere01g4010 486 MobiDBLite consensus disorder prediction 1 21 - -
Dere01g4010 486 CDD PP2Cc 60 379 IPR001932 -
Dere01g4010 486 MobiDBLite consensus disorder prediction 385 445 - -
Dere01g4010 486 Coils Coil 423 450 - -
Dere01g4010 486 Gene3D - 56 381 IPR036457 -
Dere01g4010 486 PANTHER PROTEIN PHOSPHATASE 36 377 IPR015655 GO:0004722|GO:0006470
Dere01g4010 486 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g4010 Dere-ChrDere01 53869216 53873350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g4010 1 474 PP2C-type Phosphatase Gene Family AT3G02750 62.808 0.0 596