Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3910 ATGCATACTCTCTTGCTCTGTATTGTTTTCGTCGCTGCTTCCTTGAGAGCCCATGAAGCATTAGCTAAGGACTCAGAGCCCTTGATCTTGGGCTGTGGATTGGGCAATGATGGTGGTAAAGATGCAGATGGAAGGAAATGGGGGCCAGATACTCAATATCTGTCAAGAGGTGATTCCTCGTCATTTAAAGCCTCATACCAAGACCCTTCGATTTTGTCTGAGATTCCGTACATGTGGGCCCGAGTTTTCACATCTGAAGCAACATATAAGTTCCCTGTTCAACCTGACAAGCGTTATTGGCTCAGGCTCCATTTTTATCCCTCTGTCTATGGTACTTACAATCCAAGCAATTCATATTTTTCTGTAACGGCCAACGGTGTTACGCTATTGAGCAATTTCAGCGCTTCTATTACTTGTCAAGCCTTATCTCAAGCTTACATTGACAGAGAGTATTCCCTTGCGCCTTTGAATTCAGATACTCTTACGGTTACTTTCAAGCCTTCGGACAAGTATAATCAGGCTTTTGCTTTTGTCAATGGCATTGAGGTGATTCCAATGCCGGATTTGTTTGATTCAGCCGCGTTGGTTGGGTTTTCTGATGAAACCATCGATGCAAGAAGCATGAATTTCCAAACAATGTTTAGGCTAAACGTTGGTGGGCAGTATATATCTTCAACCCAGGATTCTAGTCTTACAAGGATGTGGTACGATGATACACCTTATTTATACGGTGCATCAGTTGGTGTCACCAACCAAGCTGGTAAGGATGTTAGCATTGACTTTCAATCCATGCCACAATACATTGCTCCCTCCAGTGTCTACTCGACATCAAGATCAATGGGAAGCGATGGGAATCTGAACATGGGATACAACCTCACATGGACTTTCCAAATTGATCCAAGGTTCATGTACCTGGTGAGGTTTCACTTCTGTGATTACTTCTATTCTAGAGTGAACGAGATAGTTTTCAATATCTACGTGAACAATCAAACAGCAAAAGCTGGAGCAGATGTAATAGGGTGGACAGGAGGGAAGGGGGTGCCAACGTACAAGGACTATGTAGTAGTTGTGCAAGATGGACAGAGCAATGAGCTGCTTTGGATTGCTCTACATCCAGCACCAGAAACAAAGCCTGAGTTTTATGATGCAATACTGAATGGATTAGAGATATTCAAGATCAATGATACAACCTTGGCTGGCCCAAATCCTCAGCCTTCAAAAATGCTAATGAAGAGTATGCAACAGTCACAAACTTTTAATGACACGCCCAAAGGCCAACACAATAAGACGGTTTTTTTGCGCAGAGCTGCTGGAGGAGCAGTAGGTGTTGCACTAGTGGCTGCAATATGCATTGTTGTGTACCAAAGGAAGAAGAGAGTTCCTGGATCAGATTCACACACATCTTGGCTATCAATCTATGGTGGAAATGGGAATTCGAATACCAATGGCAGCAAATCCACAAACTCAGGGAAAAGCTATGTTGGTAGCAATATGTCAGCCATGGCTCAAGGTCTGTGTCGCTATTTTTCCTTGCAAGAGATCAAGCAAGCAACAAAGAATTTTGACGAGTCTAATGTTATTGGGGTTGGAGGATTTGGAAAAGTTTATAAGGGAGTTATAGATAATGGGATGAAAGTGGCTATTAAAAGGTCGAATCCACAATCAGAGCAAGGAGTTAATGAATTTGAAACTGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGGTTCTGCGAGGAGGGGAATGAGATGTGCCTGGTTTATGACTACATGGCACGTGGCACCTTAAGGGAGCATCTGTACAAGGGCAACAAATCCATGTCTACTCTGTCGTGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTATCTTCACACAGGGGCAAGGTACACCATCATTCATAGAGATGTCAAGTCAACTAACATTCTGTTGGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGGTTATCAAAAACAGGTCCAGACATGAAAAATGGGCATGTTAGTACAGTGGTGAAGGGTAGCTTTGGATACTTGGACCCTGAATATTTCAGGAGGCAACAATTGACTGAGAAGTCTGATGTGTATTCCTTTGGGGTTGTCCTTTTTGAGGTTCTGTGTGCGAGGCCTGTTTTGAATGCTAACCTTTCAAGAGAACAAGTGTCTCTTGCAGATTGGGCTCTGAGCTGTAAAAGAAAAGGGACTCTGGAGGCTATTATTGACCCACATCTCAAAGGAAAGATCAATCCAGAAAGCTTGAGTAAGTTTGCAGACACAGCTGAAAAGTGTTTGAGCGATCATGGGATTGATCGACCCTCTATGAATGATCTATTGTGGAATCTGGAACTTGCGCTCAGCCTCCAAGAAAACACAGATGGTTCAATTCACTCTTCCAAAGGTAACGAAAGTGAGTTCCAAGAAGTTAGCTTGACAAACAACGATGTGGGAGTAGCTGAGTACAAGCAAAGCCTTGCAGGTGAGCATGAGATGAGCCAAGATTCTAGCGATGGTGCCTCTGCCATCTTCTCGCAAATCGTCAATCCAACTGGGCGATGA 2592 0.4352 MHTLLLCIVFVAASLRAHEALAKDSEPLILGCGLGNDGGKDADGRKWGPDTQYLSRGDSSSFKASYQDPSILSEIPYMWARVFTSEATYKFPVQPDKRYWLRLHFYPSVYGTYNPSNSYFSVTANGVTLLSNFSASITCQALSQAYIDREYSLAPLNSDTLTVTFKPSDKYNQAFAFVNGIEVIPMPDLFDSAALVGFSDETIDARSMNFQTMFRLNVGGQYISSTQDSSLTRMWYDDTPYLYGASVGVTNQAGKDVSIDFQSMPQYIAPSSVYSTSRSMGSDGNLNMGYNLTWTFQIDPRFMYLVRFHFCDYFYSRVNEIVFNIYVNNQTAKAGADVIGWTGGKGVPTYKDYVVVVQDGQSNELLWIALHPAPETKPEFYDAILNGLEIFKINDTTLAGPNPQPSKMLMKSMQQSQTFNDTPKGQHNKTVFLRRAAGGAVGVALVAAICIVVYQRKKRVPGSDSHTSWLSIYGGNGNSNTNGSKSTNSGKSYVGSNMSAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFETEIEMLSKLRHKHLVSLIGFCEEGNEMCLVYDYMARGTLREHLYKGNKSMSTLSWKQRLEICIGAARGLHYLHTGARYTIIHRDVKSTNILLDENWVAKVSDFGLSKTGPDMKNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNANLSREQVSLADWALSCKRKGTLEAIIDPHLKGKINPESLSKFADTAEKCLSDHGIDRPSMNDLLWNLELALSLQENTDGSIHSSKGNESEFQEVSLTNNDVGVAEYKQSLAGEHEMSQDSSDGASAIFSQIVNPTGR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3910 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Dere01g3910 863 PANTHER OS07G0166700 PROTEIN 505 800 IPR045272 GO:0004714|GO:0006468
Dere01g3910 863 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Dere01g3910 863 FunFam receptor-like protein kinase FERONIA 483 596 - -
Dere01g3910 863 FunFam Receptor-like protein kinase FERONIA 597 812 - -
Dere01g3910 863 Gene3D - 30 186 - -
Dere01g3910 863 Gene3D - 208 394 - -
Dere01g3910 863 FunFam FERONIA receptor-like kinase 208 394 - -
Dere01g3910 863 Gene3D Phosphorylase Kinase; domain 1 481 596 - -
Dere01g3910 863 MobiDBLite consensus disorder prediction 835 863 - -
Dere01g3910 863 FunFam FERONIA receptor-like kinase 27 187 - -
Dere01g3910 863 MobiDBLite consensus disorder prediction 839 863 - -
Dere01g3910 863 ProSiteProfiles Protein kinase domain profile. 521 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3910 863 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3910 863 SUPERFAMILY Protein kinase-like (PK-like) 495 794 IPR011009 -
Dere01g3910 863 CDD STKc_IRAK 527 794 - -
Dere01g3910 863 Pfam Malectin-like domain 31 393 IPR024788 -
Dere01g3910 863 Gene3D Transferase(Phosphotransferase) domain 1 597 817 - -
Dere01g3910 863 Pfam Protein tyrosine and serine/threonine kinase 525 789 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3910 Dere-ChrDere01 52935828 52938536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3910 25 863 Receptor kinase-like Gene Family AT3G51550 53.068 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g3910 Malectin_like 6e-37 CL0202