Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3890 ATGGAGCTTCCTTCGAACCTATTAGCGGACGAGGCGAGCCCGGAGTGGATGAACAAAGGGGACAACGCGTGGCAATTAGTTGCCGCCACGGTGGTGGGTCTCCAAAGCATTCCGGGGCTGGTCATACTCTACGGAAGCCTGGTGAAGAAGACGTGGGCCGTTAACTCTGCTTTCATGGCCTTCTACGCCTTCGCAGCAGTTCTCCTCTGCTGGGTTTCCTGGGCTTTCCACATGTCTTTTGGCCACAAACTCGTCTTCTTCCTGGGAAAACCAGCTGTGGCATTGGACGAGAAGTTCCTGTTAGGGAAGGCATTTCTGGGGATGTTTCCCACTGCTACCATGGTCTTCTTTCAGGGTGTGTTCGCTGGGATTACCTTGATTTTGATAGCCGGCGCCTTACTTGGAAGAATGAACTTTCGAGCATGGATGCTGTTTGTGCCACTCTGGCTTACTCTTTCCTACACCGTCACTGCCTTCAGCATTTGGTGCCCCGATGGGTGGCTTGCAAAGCTTGGGGTCATCGACTTCTCCGGAGGCTATGTTATCCACCTCTCCGCCGGTGTTGCTGGTTTAACTGCTGCCTACTGGATACATACATACACACACGGAATGGTATTTGATATTGAACAGGTGGGTCCAAGATCAGATGCGGATAGAGAAGCGGGTCCGGAAACACCAAACAACATGATTATAGTGCTTGCGGGCGCAGGGCTGCTGTGGATGGGGTGGACTGGATTCAACGGCGGAGGTCCGTTCGTGGTGAGCACGGTCGCATCGCTGGCCGTGCTCAACACACACGTGTGTGCCGCCACCAGCATCGTCGTCTGGGTCATCCTCGACATCTTCTACTTGGGAAAGCCCACTGTGTTCGGCGCCGTACAGGGCATGATCGCTGGCCTCGTCTGCATTACTCCCGGCGCAGGGGTTGTGCAAGGGTGGGCAGCGATCCTAATGGGATTGATATCAGGAAGCGTTCCCTGGTACACCATGATGATACTCCAAAACAAGGTCAGCTTCTTGAGGAGAATCGATGACCCCATGGCCGTCTTCCACACCCACGCCGTCGCCGGCATTCTTGGTGGCGTTCTCACCGGCTTCTTCGCGGTTCCTAAGCTGTGCCGTCTCTTCTACATGGTACCTGATTGGGACAAATACATCGGCCTCGCCTATGCCCTTCAGAACGGTTCTACTCACGCGGGTTTGAGACAAATGGGGATGCAACTCGGAGCCATTGTCTTCGTGGTCTGCTTCAACGTTGTCATCACCAGCTTCATTTGCTTGCTCGTGAGGACCCTAGTACCACTTCGAGTGGAGAGCGAAGCATTGGTTATGGGGGACAAGGCAGTCCATGGAGAGAATGCTTTTGTGTTGTGGAGTACTGAGGGTGGAAGATTCCAGAATCTAAAGCGCAATAAAGTTTATCATGCCGAAGACTACCCATCCTTTGAATCAAGGACGTCAATGAGCGAACTTCAAATGGCATAA 1485 0.5333 MELPSNLLADEASPEWMNKGDNAWQLVAATVVGLQSIPGLVILYGSLVKKTWAVNSAFMAFYAFAAVLLCWVSWAFHMSFGHKLVFFLGKPAVALDEKFLLGKAFLGMFPTATMVFFQGVFAGITLILIAGALLGRMNFRAWMLFVPLWLTLSYTVTAFSIWCPDGWLAKLGVIDFSGGYVIHLSAGVAGLTAAYWIHTYTHGMVFDIEQVGPRSDADREAGPETPNNMIIVLAGAGLLWMGWTGFNGGGPFVVSTVASLAVLNTHVCAATSIVVWVILDIFYLGKPTVFGAVQGMIAGLVCITPGAGVVQGWAAILMGLISGSVPWYTMMILQNKVSFLRRIDDPMAVFHTHAVAGILGGVLTGFFAVPKLCRLFYMVPDWDKYIGLAYALQNGSTHAGLRQMGMQLGAIVFVVCFNVVITSFICLLVRTLVPLRVESEALVMGDKAVHGENAFVLWSTEGGRFQNLKRNKVYHAEDYPSFESRTSMSELQMA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3890 494 Gene3D Ammonium transporter AmtB like domains 5 459 IPR029020 -
Dere01g3890 494 Pfam Ammonium Transporter Family 23 454 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dere01g3890 494 PANTHER AMMONIUM TRANSPORTER MEP2 5 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere01g3890 494 SUPERFAMILY Ammonium transporter 16 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3890 Dere-ChrDere01 52767341 52768978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3890 112 482 Inorganic Solute Cotransporters AT2G38290 50.000 8.44e-117 346