Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3882 ATGCCTTCCAGGGTAACCATTCGCTCAGCCCTCACGGCCGTATCCAGCAAACCCATCGGGTCGGGTCTAACCCAACCGTTGTCGGCGCTGGATCATGCAATGGGGCTCCACACCCTCCACCTGGTATTCTACTACGACCGTAATTTGTTCGGGTCCTTCGACTTGGACCCGTCAAGGGAGTCGCTGTCGGAGGCACTGTATCTGCACCCGATGGTTACAGGTCGGTTGGCCCGACGGACGCATGGTAACTGGGAAATCAAGTGCAACGATGCGGGTCTTCGGGTCATCAAAGCCACCGTGGATACCACCCTCGACGAATGGCTGAGATCAGCCAATGGAGCCGAAGAGAGGGATCTCACGGCTTGGGACGACATGCCCGACGATATCCAAACATGGTCACCATTTCGAGTACAGATAAACGAATTCCAAGGAGGAGGTGTTGCAGTAGGACTCAGCTGCACTCACCTGCATGCTGACGTAACTTGGGTTGCCTCCTTCTTCAAATCATGGGCCCACCATCATCGCCATTTGCCCGTTACTCCTCTCAACGGTTCAACCTGTCTTCCCCTTCCACCCAACCCTAACCATACCCCACCTCCTTTCTATGCTGCCATGTCCTCCTCTAAACCACTCACCCCATCGCCAAAATTGGCCACAGTCACTTTCAAGTTCTCAGCTTTATCCATCATTCAATGCCTCTCCCACCTTCATCCCAATGCCACTCCTTTTGACTTCCTCGCGGCTCTGTTTTGGACCCGTATTTCTAGCTTGAAGCCTCCAAGAAATGACCAAACTCATCACTCTCTGTCGCTCTGCATCGACTTTAGGAGCATCTTGAAATCACCACTTCCCACTGGGTATATGGGTAACGCCTTGCATTTTTCGTTGCTCTCATTGGAAGCGAAACACATGCAGAGCAGCCGATTTGGGGATATAGCTGATTTAATACATACCCATTTGGAGGGGATTGGGGAAGGAGAAATTAGGTCGGCCATAGAGTGGCTTGAATCTCAAAGGGAATCAGAAGGCGGCAAGTACAGAGCACCCACTTGCATGTATGGTCCTGAGCTAACTTGTGTGAACATGGAGCACATGATAATTGATGGGCCACATGGTGAAGCGGGGACACAGGCGTCGTTGTTGTATGAAGCAATATTCCACGAGGGGGAGAGGCCAATTCATGTTTCGTGTCATGTGGGGAATGTGGGAGGTGAAGGTTTGGTGTTGGTGATGCCTTCGCCGGAAGGAGGGCCTGCCAGAGCGGTGACGGTGATGTTGCCGGAGGAACAACTGGGGGTGTTATGCAAGGATCAAGCCATATTGCAGCTTCAGCCAACTATGGTTCTTGGTGGTACACCATTGTCCCGCTGA 1371 0.5237 MPSRVTIRSALTAVSSKPIGSGLTQPLSALDHAMGLHTLHLVFYYDRNLFGSFDLDPSRESLSEALYLHPMVTGRLARRTHGNWEIKCNDAGLRVIKATVDTTLDEWLRSANGAEERDLTAWDDMPDDIQTWSPFRVQINEFQGGGVAVGLSCTHLHADVTWVASFFKSWAHHHRHLPVTPLNGSTCLPLPPNPNHTPPPFYAAMSSSKPLTPSPKLATVTFKFSALSIIQCLSHLHPNATPFDFLAALFWTRISSLKPPRNDQTHHSLSLCIDFRSILKSPLPTGYMGNALHFSLLSLEAKHMQSSRFGDIADLIHTHLEGIGEGEIRSAIEWLESQRESEGGKYRAPTCMYGPELTCVNMEHMIIDGPHGEAGTQASLLYEAIFHEGERPIHVSCHVGNVGGEGLVLVMPSPEGGPARAVTVMLPEEQLGVLCKDQAILQLQPTMVLGGTPLSR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3882 456 Gene3D - 211 436 IPR023213 -
Dere01g3882 456 Gene3D - 4 210 IPR023213 -
Dere01g3882 456 Pfam Transferase family 4 438 - -
Dere01g3882 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3882 Dere-ChrDere01 52719261 52722275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3882 36 436 Monolignol Biosynthesis Gene Families AT5G48930 27.163 2.16e-24 103