Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3869 ATGAATGGGGTCGCAAAACTTGAACCTGATTATTCCGAGTTCGTCGAAGTTGATCCAACTGGCAGATATGGCAGATACAACGAAATCCTCGGCAAAGGAGCTTCAAAGATAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCGTGGAACCAAGTCAAACTGAATGATTTCTTGCAAAGCCCTGTAGACCTTGAGAGGCTTTACTGTGAAATTCATCTCCTTAAAACACTAAAGCACAAAAACATTATGAAATTTTACACTTCTTGGGTCGATACTGCAAATAGAAATGTCAACTTCGTCACTGAAATGTTTACTTCTGGTACTCTTAGACAGTATAGGCTAAAACATAGGAGAGTGAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCCTGAGGGGACTTCTGTATCTTCATAGCCATGACCCACCTGTGATCCACAGAGATCTCAAATGTGATAACATTTTTATTAATGGCAACCAAGGGGAAGTGAAGATTGGTGATCTTGGCCTGGCAGCAATTCTCAGAAAATCCCATGCTGCTCATTGTGTCGGAACTCCTGAGTTCATGGCCCCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTTGGAATGTGCATATTAGAAATGGTAACATTTGAATATCCTTATAGCGAATGCACTCATCCAGCACAAATCTACAAAAAAGTTATTTCTGGGAAAAAACCAGATGCTTTATGTAGAGTAAAGGATCCAGAAGTGCGACAATTTGTTGAGAAATGCTTGGCAACAGTGTCCTTGAGGCTCTCAGCAAGGGAGCTTCTTGATGACCCTTTTCTCCAAATTGAGGGTAATTCACTTGATTTGGGACCAGTAAGCAGTGGAGAATTTGATGACTTGGGTCCTTTCATCCGGCATCCATCGTTAGATCTTTACCGAAGTTATAGTAACTTAAGTAGTGAATACTCTAACAATTATGGATATGAAGTTCTAGGGGACTGGTATCCTCAGCCAGCTGACACTGAACCAAGTGGGATCGAACTTTTTGAGCACCATGACGATGAACCATATGATGACATTGACATAAGCATCAAGGGCAAGAGGAAAGATGACGGTAGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGACATATCCGAAATATTTATTTCCCATTTGACATAGAGACAGACACAGCATTAAGTGTGGCAACTGAAATGGTTGCAGAACTTGACATTACTGATCAGGATGAAACCAGAATAGCTGACATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGGCCTGGACTAGTCATTGAGGAAACTCCCCATTTCACAAATCAAAATTGCTGTCACAATTGCGCATCTAATCATACATCTAGTGGCTCATTTATGGATTTTCTGTCACATAATTCAAGCGCACAGAACTCGCAACTTCTTCCGTGCTGTAGGCATAGATGTGGTTCAATGCATGGGCGGTTTGAGGAGATTACGTATCAATCTAAGGAGTATGACAATCACGCTAGAGAAGATACTCCTAACGCATCAAGCCAGTTAGACTGCCTGCAGTTTCAGGAGTTATGGAAACATCATGAAAATCGAGAGATCACTCCTGTGAATTCTGAACGTAGCCATTCTGATGAATAA 1662 0.4079 MNGVAKLEPDYSEFVEVDPTGRYGRYNEILGKGASKIVYRAFDEYQGIEVAWNQVKLNDFLQSPVDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNVNFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALCRVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIEGNSLDLGPVSSGEFDDLGPFIRHPSLDLYRSYSNLSSEYSNNYGYEVLGDWYPQPADTEPSGIELFEHHDDEPYDDIDISIKGKRKDDGSIFLRLRIADKEGHIRNIYFPFDIETDTALSVATEMVAELDITDQDETRIADMIDGEIASLVPEWRPGLVIEETPHFTNQNCCHNCASNHTSSGSFMDFLSHNSSAQNSQLLPCCRHRCGSMHGRFEEITYQSKEYDNHAREDTPNASSQLDCLQFQELWKHHENREITPVNSERSHSDE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3869 553 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Dere01g3869 553 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Dere01g3869 553 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 525 - -
Dere01g3869 553 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 429 IPR024678 GO:0004674|GO:0005524
Dere01g3869 553 Gene3D - 373 447 - -
Dere01g3869 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Dere01g3869 553 CDD STKc_WNK 22 281 - -
Dere01g3869 553 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Dere01g3869 553 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3869 553 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Dere01g3869 553 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Dere01g3869 553 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3869 553 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3869 Dere-ChrDere01 52623069 52625512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3869 1 502 MAP Kinase Kinase Kinase AT3G22420 56.618 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere01g3869 Pkinase 3.2e-48 CL0016