Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3864 ATGGCCTCCGATCAACACGACACCGTTTTCCCTGAAGAGGATCTAGACGACGACGACGACGAATCTCTTGAAGATGACGACGACGATGATGTTCTCGGTGACGATGAAGATCACGAAGCATCTCCTTCCACCTCTTCCGCCCTTGCCGTTCCCGTCCCCGACGCTTCCGCCACCGTCACCGTCGCCGTACCTGGTTCCGCCCTCTCCAACGGCGCAAACGCCCCAATTTCCGCGACCACTGCTACCACAATTGTCGTCCCTGATTCCGTCGATCCGAAACGTCAGCGCATCGATCAGAACGAAGAGAAAAAGCCTCTGGACGATTCCCGAAGACTTTTTCAGCGTCTTTGGACCGATGAGGACGAGATCGAGCTCTTACAAGGCTTCCTTGAATACACCACGCAACGAGGATCCTCCCATCATAACGACACCGCTTTGTTCTACGACCAAATCAAGTCCAAGCTTCAGCTTGACTTCAATAAGAACCAGCTCGTTGAGAAGCTCCGAAGGTTGAAGAAGAAGTACCGCAATGTTTTAAATAAGATTAGCTCCGGTAAAGAATTGTCCTTTAAGAGCCCCCATGATCAAGCCACCTTCGAAATTTCTCGTAAGATCTGGAGCAATTTGGGTTCAACCGGCGCTGCTGCCGAAGATAACGCGTTGGACGACGACGAAATTAGCCCCAACCCTAACCCTAACCCCAATTTTAGCCACTCACTGTCCAAGAATGAGGTAATTATCGGGATTCCTGCGGAGAAGAGAACCCCATCGTCACGTAAACGCTCACGGTCTCGATCAGGGATCAGAACCGAGGAGAAGCGCGAGTTGAATGATGGTTTGGCGTCAAACAAAGATAATTATTGTATTGGTAACGCTAATGCTAATACTAATAATAATTATAGCAATAACCATAGCATACCAGGTTTGATTGAGGAGACAGTGAGGAGTTGTTTGTCGCCCTTGTTCAAGGAGATACTGACTAGTGCCATGGGAGGCCCATTTGGGGCTAGAGGGTTTGGAGGATTGACGTTAAATCCCATACCATTGAGCTTCGGCGTGCCATCCCTGATGAATTGTGGGAGCGGAGAAATTGTAGATGAGAAATGGAGGAAGCAACAGATTCTGGAGTTGGAAGTGTACTCGAAGCGGCTGGAGTTGGTGCAAGATCAGATCAAGGCTGCGTTGGAGGAGCTGCGATCCACTGGACGATGA 1212 0.4983 MASDQHDTVFPEEDLDDDDDESLEDDDDDDVLGDDEDHEASPSTSSALAVPVPDASATVTVAVPGSALSNGANAPISATTATTIVVPDSVDPKRQRIDQNEEKKPLDDSRRLFQRLWTDEDEIELLQGFLEYTTQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISSGKELSFKSPHDQATFEISRKIWSNLGSTGAAAEDNALDDDEISPNPNPNPNFSHSLSKNEVIIGIPAEKRTPSSRKRSRSRSGIRTEEKRELNDGLASNKDNYCIGNANANTNNNYSNNHSIPGLIEETVRSCLSPLFKEILTSAMGGPFGARGFGGLTLNPIPLSFGVPSLMNCGSGEIVDEKWRKQQILELEVYSKRLELVQDQIKAALEELRSTGR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3864 403 MobiDBLite consensus disorder prediction 1 53 - -
Dere01g3864 403 MobiDBLite consensus disorder prediction 264 279 - -
Dere01g3864 403 MobiDBLite consensus disorder prediction 226 242 - -
Dere01g3864 403 Coils Coil 377 397 - -
Dere01g3864 403 Pfam Protein of unknown function, DUF573 113 207 IPR007592 GO:0006355
Dere01g3864 403 PANTHER BNAANNG10740D PROTEIN-RELATED 6 397 IPR007592 GO:0006355
Dere01g3864 403 Coils Coil 161 181 - -
Dere01g3864 403 MobiDBLite consensus disorder prediction 220 279 - -
Dere01g3864 403 MobiDBLite consensus disorder prediction 10 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3864 Dere-ChrDere01 52606155 52607366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3864 1 400 GeBP Transcription Factor Family AT5G28040 45.455 2.67e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Dere01g3864 DUF573 1.6e-34 CL0123