Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3856 ATGAAGAACATTTTCAAGAAGCTTCACAAAGGGAGCAACCACGATCCTAATCGATCCAATGAAACCGCGGCTTCCGCAGCATCACCGTCTTGCGCCTCCGATCAACGTACTGCACCCCCTCAAAACTCTGCCCCTTCTCCGGCTAGTCCTTCTTCATCATCTCCCTCGACGGCAACTGTCGGCGCTTCCCAGCCGCCACCCGCTACGCCGAACCGGCAAGACTATTTTTCGTCGGAAGAGGAGTTTCAGGTTCAGCTAGCCCTGGCCATCAGCGCTTCCAAGTCTGATTTCCGAGATGATCCTGAAAAGGATCAGATCCGAGCGGCAACGCTGCTGAGCTTAGGAGGCCATGGAATTGATGCAGCAAGGAATCATGATGACGTGGCAGAGGCACTGTCGAGACAGTACTGGGAATACAATGTGCTTGACTATGGGGAGAAAGTAGTAGACGGTTTTTATGATGTATATGGGCTTTTTACTGATTCAGCAATGCAAGGAAAGATGCCGTCTCTGACAGAACTTGAAGCAAACCCTGGAAACTCAACCTTTGAAGTTGTCATAGTGAATCGAACAATTGATCCTGCCTTGGAAGAGTTGGTGCAAATTGCGCATTGTGTAGCATTAGACTGCCCTGTCACTGAGGTTGGTGTTTTGGTACAAAGACTGGCTGAGCTTGTAACAGGGCATATGGGTGGTCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACGGAAAGAAGTACAGAGCTACGGACATCTCTTCACATCAGTGTGTTACCTCTTGGGTCCATAAATGTTGGGCTATCCAGACATCGTGCTTTGCTTTTCAAGGTATTAGCTGATAATATCAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGCTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGTACACTTATTCCAACTGATAATTTTAATGCAAAGGATCCTTCCTTTAAGCCATTCAATTCCGAGAGTTTGTCAAGCTTTCAATCCACAAAGGAAACTGGATTCTCTTACTCAAGACCAATGCCATCTAATGGTGAAGGCAGTAGTCAGAGTTCCATGATTAGAGGTGGTTTGCCACCCTTGAATGTAAAACCATATTTTGAGAAGTCTGATTACATGTCTTCAAACTTGTCTTTGAGTGGAGATACTGGTGTTGGTCCTTCCAAAGTGCCTAATAAAGTGACTCCTAGCCAACCGGAAAATTTTGCACCATTAGCTGGTGGTTGTCTGTACAAAGGGACTCGTGGATTGAATGCTGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATGGTCAGAGTAGCCTAGATGACTCTAGGAGCCTTTTCGCGGATCTTAATCCATTCCAGATAAAAGGAACAGGTAAGACTGCTGTACATAACAAACCTGTAGAAAACAAAGCTCCTGAGCTTCGTAGTACAAAAGAAAACCCTGTTTCTGGTCGACCCCCGGTACCTTTGATGTGGAAGAATCGTTATGCCTACAATGAAGTCCCCAGGAAGATTAACCGTAATCCTAATGAATATAACCCTTCCTTATTATCTTCCAATAGTTCTTCCATATCAGAAAAGGTTGATCTCAATGGTTCCAACTCATCATACTATTCAAATATGAATAGAGATAAGGATACTCAACGTTTGATGCAAGTTACTGGTACAGTATCAGCGTCTAGTTCAAGTGATCTGAACAGAACTGAAGATTTCAATGCTGAATGGAATAGAGGGAATGTAGAAAAATCTCAAGATAACAAGGTAGATGTGGTTAAAGAACAGGAAAACAATGAATTTGGATTTTATGACCAGAGAAAATACAATCATGACAGATTCATGGGGAGCAATTTGAAATTAAAGGATCCAGAGAGTCCTAGCTCATCTATTGATCCCATCACAAACAGGGTTGACCAAATATTGGATGATGCTGATGTGGGTGAATGTGAAATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGATCATATGGCGAGGTATACCAAGCTGACTGGAATGGCACGGAGGTTGCTGTGAAGAAGTTTTTGGATCAGGATTTTTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTACGGATAATGCGGAGGCTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTACAGAATTTCTTCCGAGGGGAAGCCTGTACCGAATTCTTCATCGTCCTAATTGTCAGATTGATGAGAAGCGCAGGATTAAAATGGCTCTGGATGTGGCAAGGGGTATGAATTGTTTACACACCAGCACACCTACTATTGTTCACCGAGATCTCAAGTCACCAAATCTTTTGGTTGATAACAATTGGAATGTCAAGGTATGTGATTTTGGGTTGTCACGACTGAAGCACAACACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGCAATGAGCCCTCAAATGAGAAGTGTGACGTATACAGTTTTGGAGTCATCCTATGGGAGCTTGCCACTCTAAAGCTGCCTTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAATCGTCGGCTAGATATCCCCAAGGAAGTTGATCCTTTAGTTGCAAGAATTATCTGGGAATGTTGGCAACAGGATCCCAATATGCGGCCCTCATTTGCACAACTTGCAGTAGCGCTAAAACCCCTGCAGCGTCTAGTTATACCATCTCATCAAGACCAGCTGGCTTCACCTCTGCCACAGGAGATTTCTGTAAATTCTACCCCTTGA 2877 0.4393 MKNIFKKLHKGSNHDPNRSNETAASAASPSCASDQRTAPPQNSAPSPASPSSSSPSTATVGASQPPPATPNRQDYFSSEEEFQVQLALAISASKSDFRDDPEKDQIRAATLLSLGGHGIDAARNHDDVAEALSRQYWEYNVLDYGEKVVDGFYDVYGLFTDSAMQGKMPSLTELEANPGNSTFEVVIVNRTIDPALEELVQIAHCVALDCPVTEVGVLVQRLAELVTGHMGGPVKDANIILARWTERSTELRTSLHISVLPLGSINVGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDNFNAKDPSFKPFNSESLSSFQSTKETGFSYSRPMPSNGEGSSQSSMIRGGLPPLNVKPYFEKSDYMSSNLSLSGDTGVGPSKVPNKVTPSQPENFAPLAGGCLYKGTRGLNAVGDGTRLNVNVVPYGQSSLDDSRSLFADLNPFQIKGTGKTAVHNKPVENKAPELRSTKENPVSGRPPVPLMWKNRYAYNEVPRKINRNPNEYNPSLLSSNSSSISEKVDLNGSNSSYYSNMNRDKDTQRLMQVTGTVSASSSSDLNRTEDFNAEWNRGNVEKSQDNKVDVVKEQENNEFGFYDQRKYNHDRFMGSNLKLKDPESPSSSIDPITNRVDQILDDADVGECEIPWEDLVLGERIGLGSYGEVYQADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQQDPNMRPSFAQLAVALKPLQRLVIPSHQDQLASPLPQEISVNSTP 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3856 958 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Dere01g3856 958 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 60 933 - -
Dere01g3856 958 MobiDBLite consensus disorder prediction 355 378 - -
Dere01g3856 958 MobiDBLite consensus disorder prediction 17 74 - -
Dere01g3856 958 ProSiteProfiles Protein kinase domain profile. 677 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3856 958 Pfam Ethylene-responsive protein kinase Le-CTR1 129 327 - -
Dere01g3856 958 PRINTS Tyrosine kinase catalytic domain signature 837 847 IPR001245 GO:0004672|GO:0006468
Dere01g3856 958 PRINTS Tyrosine kinase catalytic domain signature 900 922 IPR001245 GO:0004672|GO:0006468
Dere01g3856 958 PRINTS Tyrosine kinase catalytic domain signature 751 764 IPR001245 GO:0004672|GO:0006468
Dere01g3856 958 PRINTS Tyrosine kinase catalytic domain signature 856 878 IPR001245 GO:0004672|GO:0006468
Dere01g3856 958 PRINTS Tyrosine kinase catalytic domain signature 790 808 IPR001245 GO:0004672|GO:0006468
Dere01g3856 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Dere01g3856 958 SMART serkin_6 677 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3856 958 Gene3D Phosphorylase Kinase; domain 1 670 754 - -
Dere01g3856 958 FunFam Serine/threonine-protein kinase CTR1 756 939 - -
Dere01g3856 958 MobiDBLite consensus disorder prediction 1 74 - -
Dere01g3856 958 MobiDBLite consensus disorder prediction 489 508 - -
Dere01g3856 958 Gene3D Transferase(Phosphotransferase) domain 1 756 938 - -
Dere01g3856 958 CDD STKc_MAP3K-like 683 925 - -
Dere01g3856 958 SUPERFAMILY Protein kinase-like (PK-like) 668 948 IPR011009 -
Dere01g3856 958 Pfam Protein tyrosine and serine/threonine kinase 678 927 IPR001245 GO:0004672|GO:0006468
Dere01g3856 958 FunFam Serine/threonine-protein kinase isoform 1 668 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3856 Dere-ChrDere01 52550768 52557436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3856 1 913 MAP Kinase Kinase Kinase AT1G08720 58.602 0.0 968
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere01g3856 PK_Tyr_Ser-Thr 6.3e-64 CL0016