Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3855 ATGTTGGATCTTCCATACCTAGCAGGCGTGTTTAGCCACAACTCTTCAGTTTCACACATGGAGATTGATCTGTCAAAAATCTCACTTCGACCTTTAAAGCTCAGCGACGCGGAGGGCGTCATGTTGTGGAAAGGTGATGAGCAAGTGACACAAAAGACCGGACTAGAGACTTGTAGTTCCATGGAAGAGGCTTTGACTTTCATCAGAGATGTATGCATTCCTCACCCATGGTATCGCTCTATATGCATCCATAACCGTTCGATTGGGTTTATTTCTGTGTCTCCTGGGTCAGATGTTCACAGGTGTAGGGCAGAGATGGGGTATGCCATTGCTGCAAGATATTGGTGTAGAGGGATAACTTCCAAGGCTGTGAAGATTGCCCTATCACAAGTCTTCAAGGACTTGCCTGATTTGGTAAGGTTGCAGGCTTTTGCAGCAGTAGAGAATAAGGCTTCTCAGAGGGTCTTGGAAAAGGCTGGGTTTCTGAAGGAGGGCTTGTTTAGAAAGTATGCTTATCTGAGGGGGATAATCATGGATGTGGTATTTTTAGTTTTGTCAACGATACTCTTCCTCCACACTAATAAGCAGTTCAAACTTCATACCTCGACGTCAGGGCTTAGTGATAATCTATCCTCTACTTCCATGGTATTTTTAACTTGTGAGACGTTGCAATATGAAGTATATGTAACCGGCTTTCATGTTAGTTTCTGTCTCACAATAAAGAAAAAGACATAA 735 0.4327 MLDLPYLAGVFSHNSSVSHMEIDLSKISLRPLKLSDAEGVMLWKGDEQVTQKTGLETCSSMEEALTFIRDVCIPHPWYRSICIHNRSIGFISVSPGSDVHRCRAEMGYAIAARYWCRGITSKAVKIALSQVFKDLPDLVRLQAFAAVENKASQRVLEKAGFLKEGLFRKYAYLRGIIMDVVFLVLSTILFLHTNKQFKLHTSTSGLSDNLSSTSMVFLTCETLQYEVYVTGFHVSFCLTIKKKT 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3855 244 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 25 182 IPR016181 -
Dere01g3855 244 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 27 183 IPR000182 GO:0016747
Dere01g3855 244 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 25 184 - -
Dere01g3855 244 Pfam Acetyltransferase (GNAT) domain 27 161 IPR000182 GO:0016747
Dere01g3855 244 Gene3D - 16 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3855 Dere-ChrDere01 52548913 52549647 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere01g3855 Acetyltransf_3 2.6e-19 CL0257