Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3854 ATGGTGGGAACAATAATGGCAATTGATATATGTAGGATCTCCCTGCGGCGATTCAAGTTAAGCGACGTCGACGACTTCTTGTTATGGGCCGGAGATGACCAAGTGACTCAGAACCTACGATGGAAGACTTGTGGTTCCAAGGAAGAGGCCTTGGCTTTCCTCAGAGATGTTTGCATCCCTCATCCGTGGCGGCGCTCTATATGCCTCGATGACCATTCGATCGGCTTTGTTTCCGTTTTTCCATGGTCAGGTGATGACAGGTGTAAGGCAGATATTGGGTACGCTGTGGCAGCCAAGTACTGGGGTCAAGGGATCGCCACAATCGCACTGAAGATTGCTGTGTCACAAGTGTTGAAGGACTTGCCCCATTTGCTAAGGTTACAAGCTTTTACGTTTGTGGAGAACAAGGCTTCTCAGAGGGTCTTGGAAAAGGCTGGGTTCCAAAGAGAGGGCCTGCTCAGAAAGTACTCTTATATCAAGGGCAACCTTAAGGATCTTGTTATCTTCAGTTTTTTGTCTACAGATAATCCTTCCCCAAACTAG 543 0.4788 MVGTIMAIDICRISLRRFKLSDVDDFLLWAGDDQVTQNLRWKTCGSKEEALAFLRDVCIPHPWRRSICLDDHSIGFVSVFPWSGDDRCKADIGYAVAAKYWGQGIATIALKIAVSQVLKDLPHLLRLQAFTFVENKASQRVLEKAGFQREGLLRKYSYIKGNLKDLVIFSFLSTDNPSPN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3854 180 Gene3D - 6 178 - -
Dere01g3854 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 13 173 IPR000182 GO:0016747
Dere01g3854 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 172 IPR016181 -
Dere01g3854 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 12 175 - -
Dere01g3854 180 Pfam Acetyltransferase (GNAT) domain 12 148 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3854 Dere-ChrDere01 52547186 52547728 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere01g3854 Acetyltransf_3 3.3e-21 CL0257