Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3836 ATGGCTGCGTTCTGCGTGGGCGTAGGGCTCAAGTTTCCTGCGGAAAAGAGAAAATTAAGATCAGACTGCGTCTTGCGAGTGGCTCTGAGGAAGAAGTGGGAGAAGGATATGGGTGCACAGAAGAAAAGTGCGGTGAAGGTTTCGGAGGAGGCTGAGGAATTGGCTCGCGTCCCCTTGCAAGCAATCCTCTTGGCTGACAGTTTTACTACCAAGTTCAGACCTATCACTCTCGAACGCCCCAAAGTTCTATTACCTCTCGTGAATGTTCCCATGATAAATTACACATTGGCGTGGCTCGAATCAGCTGGTGTTGAAGAGGTTTTTGTTTTCTGCTGTGCTCATTCTAAGCAAGTTATTTCTTATTTGAAGAAATCTGAGTGGCTCTCCCAACCAAATTTTACCGTCACAATGATAGAGTCGCATCATTCCGTTAGTGCCGGAGATGCTTTGCGCCTAATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTGATCAGTGGAGATACGGTAAGCAACATGCCACTTACCCAGGCACTTCAGGAGCACAAAGAAAGAAGGAAGAAAGATAGTGATGCCATAATGACCATGGTCATTAAACGATCAAAACCTCATCCAGCTACTCATCAATCTCGACTTGGTACTGATGAACTTTTCATGGCCATTGATCCTAATACCAAGCAACTTTTGTACTATGAGGATAAGGCAGACCATTCCAAAGGGACTCTACTTCTTGATAAATCATTGCTCCTGGATAATCCTTCCATCTCTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCACCAGAGGTTCTTAGCCTATTTACTGACAATTTTGACTACCAACATTTACGGCGTCATTTTGTCAAGGGATTGCTTGTTGACGATATCATGGGATACAAGATTTTTACTCATGAAATTCACTCAAGTTATGCTGCAAGGATTGATAATTTCCGAAGCTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCATTGGTGCCAGATGTTAAGTTTTTTGGTAATTCTGCTACTAAACTTGAAAGACAAGGAATGTATCGGGCATCAGAAATATCTCAATCGCATTCTGCAGTTATTGGCCCATTTACTGTCATAGGATTTGGCACCAAAATTGGGGATAACACTAAAATTTCAAATTCGGTTATTGGAGAAGGATGTACAATTGGGGCAAATGTTCAGATAGAGGGATCCTATATATGGGACAATGTCACCATTGAAGATGCTTGTAAACTTAGGCATGCAATAGTATGTGATGGGGTGACTATAAAATTGGGAGCTGTTCTGGAACCTGGTGTGGTTTTGTCTTTCAAGGTTGTAATTGGGCGAGAATTTGTTGTTCCTCCATACTCAAAAGTATCTTTATTTCAGCAACCAGTTGAGGAAGATAGTGACGAGGAGCTGGAATATGCTGATAGTACTGGTGCAATCACAAGCACAGTGGATAAGCATGACATAGAGGCTGCAGCGCAATTATTGGAGACACAATCTTGGTCTGCATCAGAGTTAGGTGTGGGTGGGGCTGGTTATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGATGAATGGGGGCATTCAGTGGCTCCTATTCCTGCAGATAAAATTTCTGAGGCAATAAAAGTTTTAGATGATGATCTGGAGTTGTCTCTTGATGGCAGTAATCTTCCACCTTCTGGAGAGCTGAAACCTGATTCTTATGATTCTGATGATGATATTGAAGATTCCAGAGATGACTCATACTTTGAGAAAGAGGTTGAAGCAACTTTCCTCAGGGCTGTGCATGAAAACATAAAAGAAGACCATGTGATATTAGAAGTAAATTCTTTGAGGTTGTCATACAATAAGGTAGCAGCTGATTGTGCTGGAGCTTTATTTCATGCTATTATGAAATACACACTAGACACCCCCCATAGTTCAGCTGGTAGCTTGGTTCAGACCGTTGAGGGTATACTTACAACATGGAATAAGCTTCTAACGTCCTACCTGGCTGATATTGATGAGCAGATTGAAGTGATACTAAAGTTTGAGGAAATGTGCTTGGAATCTGCTAAGGAGTTTGCTCCATTGTTCACAAAGATTTTGAGTATTATGTATGAAAAAGATATCATACAAGAAGATGCTATTTTAAGTTGGGAAGACGAGAAGAGAGACGCAGACGAGTCAGATAAAGTTTTTGTCAAGCAGGCCCAGACATTTATTCAATGGTTAAGAGAGGCCCCCGAAGAAGATGATGATGAGGAAGAATAG 2283 0.4174 MAAFCVGVGLKFPAEKRKLRSDCVLRVALRKKWEKDMGAQKKSAVKVSEEAEELARVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHSKQVISYLKKSEWLSQPNFTVTMIESHHSVSAGDALRLIYERNVIHGDFVLISGDTVSNMPLTQALQEHKERRKKDSDAIMTMVIKRSKPHPATHQSRLGTDELFMAIDPNTKQLLYYEDKADHSKGTLLLDKSLLLDNPSISLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIHRWTYPLVPDVKFFGNSATKLERQGMYRASEISQSHSAVIGPFTVIGFGTKIGDNTKISNSVIGEGCTIGANVQIEGSYIWDNVTIEDACKLRHAIVCDGVTIKLGAVLEPGVVLSFKVVIGREFVVPPYSKVSLFQQPVEEDSDEELEYADSTGAITSTVDKHDIEAAAQLLETQSWSASELGVGGAGYVWPKCEGGHEDEWGHSVAPIPADKISEAIKVLDDDLELSLDGSNLPPSGELKPDSYDSDDDIEDSRDDSYFEKEVEATFLRAVHENIKEDHVILEVNSLRLSYNKVAADCAGALFHAIMKYTLDTPHSSAGSLVQTVEGILTTWNKLLTSYLADIDEQIEVILKFEEMCLESAKEFAPLFTKILSIMYEKDIIQEDAILSWEDEKRDADESDKVFVKQAQTFIQWLREAPEEDDDEEE 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3836 760 SUPERFAMILY Nucleotide-diphospho-sugar transferases 57 405 IPR029044 -
Dere01g3836 760 Gene3D - 581 759 - -
Dere01g3836 760 FunFam Translation initiation factor eIF-2B subunit epsilon 48 339 - -
Dere01g3836 760 SUPERFAMILY Trimeric LpxA-like enzymes 304 465 IPR011004 -
Dere01g3836 760 CDD LbH_eIF2B_epsilon 377 455 - -
Dere01g3836 760 FunFam Translation initiation factor eIF-2B epsilon subunit 584 759 - -
Dere01g3836 760 CDD eIF-2B_epsilon_N 59 275 IPR035543 -
Dere01g3836 760 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 45 759 - -
Dere01g3836 760 ProSiteProfiles W2 domain profile. 587 758 IPR003307 GO:0005515
Dere01g3836 760 Gene3D Hexapeptide repeat proteins 355 494 - -
Dere01g3836 760 FunFam Trimeric LpxA-like enzyme 352 485 - -
Dere01g3836 760 CDD W2_eIF2B_epsilon 593 751 IPR044123 GO:0005085|GO:0031369
Dere01g3836 760 Pfam Nucleotidyl transferase 61 199 IPR005835 GO:0009058
Dere01g3836 760 SUPERFAMILY ARM repeat 593 751 IPR016024 -
Dere01g3836 760 SMART 542_3 667 754 IPR003307 GO:0005515
Dere01g3836 760 Pfam eIF4-gamma/eIF5/eIF2-epsilon 679 758 IPR003307 GO:0005515
Dere01g3836 760 MobiDBLite consensus disorder prediction 562 589 - -
Dere01g3836 760 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 42 339 IPR029044 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3836 37 751 Eukaryotic Initiation Factors Gene Family AT2G34970 66.113 0.0 967