Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3835 ATGGCTTTTGAATTAAGTTCTGTTCTTTCAAAATTGCAAATGCTATCCACTTCTGATCATGCCTCGGTCGTCTCTATGAACCTATTTGTGGCACTCCTCTGTGCTTGTATTGTGATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAATCAATCACTGCGCTTTTGATTGGTCTTTGCACGGGTGTAGTTATTTTGCTGTTTAGTGGAGGCAGAAGCTCGCATCTTCTTGTTTTCAGTGAAGATATTTTCTTTATATACCTTCTGCCACCTATTATATTTAATGCCGGATTTCAGGTGAAAAAGAAGCAGTTTTTCAAAAACTTCATTACCATCACGCTGTTTGGTGCTGTTGGTACAATAATATCTTGTATCGTCATAACTTTGGGTGTTACGCAAGCATTTAAAAGGATGAATATTGGTTCACTGGATATGGGAGAGTATCTTGCCATTGGTGCAATATTTGCTGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAATCAGGATGAGACTCCTTTACTCTACAGTCTTGTATTCGGGGAGGGTGTTGTCAATGATGCTACATCAATTGTGCTTTTCAACGCAATCCATAGCTTTGACCTCAACCATATTGACCACATAACTGCACTGCATTTTCTGGGCAACTTCCTGTATTTGTTTATTACAAGCACAATGCTTGGAGTTTTGGCTGGTCTGCTTAGTGCTTACATCATTAAGAAGCTGTATATTGGCAGGCACTCAACAGATCGAGAAGTTGCTCTTATGATGCTAATGGCATACCTTTCATACATGCTGGCTGAATTATGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGCGGGATTGTGATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCAAGAGTGACTACCAAGCATGCTTTTGCAACATTGTCGTTTGTTGCTGAGACTTTCTTGTTTCTTTATGTTGGTATGGATGCCTTGGACATTGAGAAGTGGAGATTTGTCAGTGATAGCCCTGGAACATCAGTAGCAGTGAGTTCAGTGTTGCTGGGTCTGGTACTAGCTGGAAGAGCAGCTTTTGTTTTTCCCTTATCGTTCTTAATTAACTTGGCTAAGAAGTCACCGAACGAGAAGATTTCCTTCCGGCAGCAAGTGATCATTTGGTGGGCTGGCCTCATGAGAGGTGCTGTTTCAATGGCTCTTGCCTATAATCAGTTCACCATGTCAGGGCATACTCAGCAGCGGTCCAATGCAATCATGATCACCAGCACCATTACTGTTGTGCTTGTCAGCACTGTGGTGTTTGGTTTGATGACTAAGCCACTCATAAGATGTTTGCTGCCTCACCCTAAACACACAGTCAGCATGACTACGGCAGATTCATCTACTCCAAAATCATTAACTGTGTCATTTCTTGGAGCTGCCCAAGATTCTGAAGCTGATCTTGATGGCCATCATATGAATCGTCCAAGCAGCATTCGTGCATTACTAACCACTCCAACACACACTGTTCATCGCTATTGGCGTAAGTTTGATGATGCATTCATGCGTCCGGTTTTTGGTGGCCGGGGTTTTGTTCCTGTTGATCCTGGCTCACCAACTGTAAGCAATGGTCATCATCAGTGGCGTTGA 1629 0.4273 MAFELSSVLSKLQMLSTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVVILLFSGGRSSHLLVFSEDIFFIYLLPPIIFNAGFQVKKKQFFKNFITITLFGAVGTIISCIVITLGVTQAFKRMNIGSLDMGEYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSIVLFNAIHSFDLNHIDHITALHFLGNFLYLFITSTMLGVLAGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAETFLFLYVGMDALDIEKWRFVSDSPGTSVAVSSVLLGLVLAGRAAFVFPLSFLINLAKKSPNEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQQRSNAIMITSTITVVLVSTVVFGLMTKPLIRCLLPHPKHTVSMTTADSSTPKSLTVSFLGAAQDSEADLDGHHMNRPSSIRALLTTPTHTVHRYWRKFDDAFMRPVFGGRGFVPVDPGSPTVSNGHHQWR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3835 542 Gene3D - 145 197 - -
Dere01g3835 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere01g3835 542 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere01g3835 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere01g3835 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Dere01g3835 542 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere01g3835 542 PANTHER SODIUM/HYDROGEN EXCHANGER 16 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Dere01g3835 542 NCBIfam sodium/hydrogen exchanger 3 25 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3835 Dere-ChrDere01 52385915 52392703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3835 6 538 Antiporters AT3G05030 76.909 0.0 850