Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3807 ATGGAAGTTAATAATACCATTAGTGTTTCTGCAGAATCACCTATTGTTGCCTCCAAGAACGATACCTACATACACCACCACTTATATTCAGAAGAGCATAACCATCATCACCATCACCATTTCCCCTCCAAAACCTTTCTCATAATCATCGTAACCCTCTCCTCCCTTATGCTCCTCTTTGCTATTTCTCTCATCATATTCATGCTCCGTCGCCTGAAATCATCCTCCAAGAATCCAACTACCAAGCGTAACACCGGAGTATTTCATGAAACAAGTAGCCGGTTCATCGCTTCAAAAACTTCGAGCTTCAACTCAAGCCCAGATGTGAGGGGAGGGTGTATTTATGGAGGAAATATGAGCAGAACAGCGGCACCTAAATTCAAAGGAGTGCAAGTATTCACATATAGGGAGCTAGAAGTGGCGACAGAGGGATTCAGTGAAGCAAATGTTATTGGGCATGGAGGATTTGGTTTCATGTACAGAGGAGTCCTGAGTGATGGCGCTTTGGCTGCAATTAAGTTGCTGCAAAGGGAAGGTAAGCAGGGGGAGCGTGCCTTCAGAATAGAGGTGGATCTTCTAAGCCGCTTGCACTCTCCTTATTTAGTGGAGTTAATTGGGTATTGTGCTGACCAAAACCACAGGCTACTTGTATTTGAATATGTGGCCAATGGTACGCTACACCACCATCTTCACTCTACTCAGGATCAAGCTCAACCGTTGGATTGGTGGACTCGCATGAGGATAGCCCTTGATTGTGCCAGGGCCTTGGAGTTCCTGCATGAGCATGCGGCCACGCCTGTGATACACCGTGACTTCAAGTCTAACAATATCATACTGGATCAAAAGTTCCGTGCCAAGGTTTCTGACTTTGGGTTGGCCAAGATGGGCTCGAACAAGATCAATGGTCAGGTTTCCACTAGGGTTTTGGGGACCACTGGATATCTGGCACCAGAGTATGCATCCACAGGAAAGCTTACTACAAAGTCAGATGTATACAGCTACGGTGTGGTTCTTCTGGAGTTGCTAACGGGGCGTGTACCAGTCGATATTAAGCGGCCTCCTGGAGAACATGTCCTTGTCTCTTGGGCTCTTCCGAAGTTAACTAACAGAGAAAAGGTTGTGGAAATGGTTGACCCAGCTCTACGTGGACAGTATTCCAAGAAGGATCTTGTTCAGGTAGCTGCCATAGCAGCAATGTGCATACAGCCAGAAGCAGACTATAGGCCGCTAATGACGGATGTAGTACAATCACTAATACCACTAGTTAGAAACCCGTCATTTATTAGTTCATCTGGTTCATTGAGATTTCAAAAACATACATTAAGTCCAAGCCATTAG 1338 0.4567 MEVNNTISVSAESPIVASKNDTYIHHHLYSEEHNHHHHHHFPSKTFLIIIVTLSSLMLLFAISLIIFMLRRLKSSSKNPTTKRNTGVFHETSSRFIASKTSSFNSSPDVRGGCIYGGNMSRTAAPKFKGVQVFTYRELEVATEGFSEANVIGHGGFGFMYRGVLSDGALAAIKLLQREGKQGERAFRIEVDLLSRLHSPYLVELIGYCADQNHRLLVFEYVANGTLHHHLHSTQDQAQPLDWWTRMRIALDCARALEFLHEHAATPVIHRDFKSNNIILDQKFRAKVSDFGLAKMGSNKINGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPKLTNREKVVEMVDPALRGQYSKKDLVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSFISSSGSLRFQKHTLSPSH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3807 445 ProSiteProfiles Protein kinase domain profile. 145 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3807 445 SUPERFAMILY Protein kinase-like (PK-like) 128 418 IPR011009 -
Dere01g3807 445 PANTHER OS07G0668900 PROTEIN 99 425 - -
Dere01g3807 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Dere01g3807 445 Gene3D Transferase(Phosphotransferase) domain 1 221 428 - -
Dere01g3807 445 Pfam Protein tyrosine and serine/threonine kinase 149 418 IPR001245 GO:0004672|GO:0006468
Dere01g3807 445 FunFam Receptor-like serine/threonine-protein kinase ALE2 221 435 - -
Dere01g3807 445 CDD STKc_IRAK 151 421 - -
Dere01g3807 445 FunFam Serine/threonine-protein kinase PBS1 113 220 - -
Dere01g3807 445 Gene3D Phosphorylase Kinase; domain 1 116 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3807 Dere-ChrDere01 52223535 52226193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3807 44 424 Receptor kinase-like Gene Family AT3G58690 57.106 7.10e-151 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dere01g3807 PK_Tyr_Ser-Thr 3.5e-44 CL0016